RNA–Protein interactions for RNA: ENST00000542630.1

COPS7A-214, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-214ENST00000542630 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
COPS7A-214ENST00000542630 PPM1MQ96MI6 270 aa12.12□□□□□ -0.47
COPS7A-214ENST00000542630 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
COPS7A-214ENST00000542630 VPS37BQ9H9H4 285 aa12.12□□□□□ -0.47
COPS7A-214ENST00000542630 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
COPS7A-214ENST00000542630 RSPH14Q9UHP6 348 aa12.12□□□□□ -0.47
COPS7A-214ENST00000542630 B3GNT3Q9Y2A9 372 aa12.12□□□□□ -0.47
COPS7A-214ENST00000542630 SPTAN1Q13813 2472 aaKnown RBP12.12□□□□□ -0.47
COPS7A-214ENST00000542630 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
COPS7A-214ENST00000542630 ANKUB1A6NFN9 424 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 C2orf74A8MZ97 194 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 GAPDHSO14556 408 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 ZNF749O43361 778 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 LDB2O43679 373 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 ANXA9O76027 345 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 CBX6O95503 412 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 CRTAMO95727 393 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 CAPN1P07384 714 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 TPM1P09493 284 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 RNF224P0DH78 156 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 CA5AP35218 305 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 CDKN2BP42772 138 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 PTPRCAPQ14761 206 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 PLEKHN1Q494U1 663 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 FAM69BQ5VUD6 431 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 MLIPQ5VWP3 458 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 SARM1Q6SZW1 724 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 ZADH2Q8N4Q0 377 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 LRRC45Q96CN5 670 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 C19orf60Q96EN9 201 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 OXNAD1Q96HP4 312 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 CCDC42Q96M95 316 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 TFB2MQ9H5Q4 396 aaKnown RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 MVB12BQ9H7P6 319 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 COPG1Q9Y678 874 aaKnown RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 ARL5AQ9Y689 179 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 AP1M2Q9Y6Q5 423 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
COPS7A-214ENST00000542630 NOTCH2Q04721 2471 aa12.11□□□□□ -0.47
COPS7A-214ENST00000542630 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 KRT86O43790 486 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ZRANB2O95218 330 aaKnown RBP eCLIP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 AGTP01019 485 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ATP1B2P14415 290 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ST6GAL1P15907 406 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 PECAM1P16284 738 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ITGALP20701 1170 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 COL8A1P27658 744 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 DCTP40126 519 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 FOLR3P41439 243 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 CD151P48509 253 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 LMAN1P49257 510 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 PRLHRP49683 370 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 TRIM14Q14142 442 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 PRPSAP1Q14558 356 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 MYBPC3Q14896 1274 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ASTE1Q2TB18 679 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ZNF789Q5FWF6 425 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 TFDP3Q5H9I0 405 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ITPRIPL1Q6GPH6 555 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 DAAM2Q86T65 1068 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 AMIGO1Q86WK6 493 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 GALNT16Q8N428 558 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 OR52E1Q8NGJ3 308 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 TRAPPC9Q96Q05 1148 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 COPS8Q99627 209 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 FICDQ9BVA6 458 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 ASF1BQ9NVP2 202 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 IFT80Q9P2H3 777 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 NDOR1Q9UHB4 597 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 FKBPLQ9UIM3 349 aa12.1□□□□□ -0.47
COPS7A-214ENST00000542630 AAR2Q9Y312 384 aaKnown RBP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 PTRH2Q9Y3E5 179 aaKnown RBP12.1□□□□□ -0.47
COPS7A-214ENST00000542630 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 SHANK1Q9Y566 2161 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 BTN3A3O00478 584 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 BTN3A1O00481 513 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 OR2B3O76000 313 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 LDLRP01130 860 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 COMTP21964 271 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 GLRBP48167 497 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 DCDP81605 110 aaKnown RBP12.09□□□□□ -0.47
COPS7A-214ENST00000542630 LLGL1Q15334 1064 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
COPS7A-214ENST00000542630 DCAF10Q5QP82 559 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 IGFL3Q6UXB1 125 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 CDHR3Q6ZTQ4 885 aa12.09□□□□□ -0.47
COPS7A-214ENST00000542630 SNX20Q7Z614 316 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms