RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 SCARF2Q96GP6 870 aaPredicted RBP9.05□□□□□ -0.96
LDHA-220ENST00000542179 TMEM237Q96Q45 408 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 PLCD4Q9BRC7 762 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 APOOQ9BUR5 198 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 LGR4Q9BXB1 951 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 TRIM55Q9BYV6 548 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 PCED1AQ9H1Q7 454 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 DPEP2Q9H4A9 486 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 ZNF395Q9H8N7 513 aaPredicted RBP9.05□□□□□ -0.96
LDHA-220ENST00000542179 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 C2orf42Q9NWW7 574 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 WSB2Q9NYS7 404 aaPredicted RBP9.05□□□□□ -0.96
LDHA-220ENST00000542179 GULP1Q9UBP9 304 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 ADAMTS6Q9UKP5 1117 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
LDHA-220ENST00000542179 DMTF1Q9Y222 760 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 TMEM98Q9Y2Y6 226 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 RAP2CQ9Y3L5 183 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 SIT1Q9Y3P8 196 aa9.05□□□□□ -0.96
LDHA-220ENST00000542179 PIKFYVEQ9Y2I7 2098 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PRR23AA6NEV1 266 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TMEM202A6NGA9 273 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 CACNB4O00305 520 aaPredicted RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 FPGTO14772 594 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 KMOO15229 486 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SLC31A1O15431 190 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 FFAR2O15552 330 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 GRID2O43424 1007 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 WIPF1O43516 503 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SNX2O60749 519 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PSIP1O75475 530 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 SUPT3HO75486 399 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 LYPLA1O75608 230 aaPredicted RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 HSPA4LO95757 839 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 IGHV4-34P06331 123 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 CEACAM5P06731 702 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 GFAPP14136 432 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 VCLP18206 1134 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 HNRNPA2B1P22626 353 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 MAT2AP31153 395 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 PFN3P60673 137 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 YPEL5P62699 121 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 ZXDAP98168 799 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 DMPKQ09013 629 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PRKAA1Q13131 559 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SETDB1Q15047 1291 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PCBP2Q15366 365 aaKnown RBP eCLIP9.04□□□□□ -0.963e-6■■□□□ 11.9
LDHA-220ENST00000542179 PFKFB4Q16877 469 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SYTL3Q4VX76 610 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 UNC50Q53HI1 259 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 ARL13AQ5H913 290 aaPredicted RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 CFAP157Q5JU67 520 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 ANKS6Q68DC2 871 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SULT1C3Q6IMI6 304 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TTC23LQ6PF05 361 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 XKR5Q6UX68 686 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 FRMD7Q6ZUT3 714 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 AMZ2Q86W34 360 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 SPATS2Q86XZ4 545 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 TRAPPC5Q8IUR0 188 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 VRK3Q8IV63 474 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 WDR75Q8IWA0 830 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 CFAP206Q8IYR0 622 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 LSMEM2Q8N112 164 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TCAIMQ8N3R3 496 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 FBXO15Q8NCQ5 510 aaPredicted RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 CCDC197Q8NCU1 140 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 HM13Q8TCT9 377 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 DLG3Q92796 817 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PHF21BQ96EK2 531 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TOE1Q96GM8 510 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 BMFQ96LC9 184 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TRIM54Q9BYV2 358 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 ILKAPQ9H0C8 392 aaPredicted RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 GSTO2Q9H4Y5 243 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 COG4Q9H9E3 785 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 KCNK13Q9HB14 408 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PARVBQ9HBI1 364 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 EML4Q9HC35 981 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 CYP4F12Q9HCS2 524 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 CD320Q9NPF0 282 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 KCNK4Q9NYG8 393 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 CD274Q9NZQ7 290 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 PTBP2Q9UKA9 531 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 ARL2BPQ9Y2Y0 163 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 OR1A2Q9Y585 309 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 TNPO3Q9Y5L0 923 aaKnown RBP9.04□□□□□ -0.96
LDHA-220ENST00000542179 EYSQ5T1H1 3165 aa9.04□□□□□ -0.96
LDHA-220ENST00000542179 IGHV1OR15-9A0A0B4J2B8 117 aa9.03□□□□□ -0.96
LDHA-220ENST00000542179 SLCO1B7G3V0H7 640 aa9.03□□□□□ -0.96
LDHA-220ENST00000542179 PRAMEF26H0Y7S4 382 aa9.03□□□□□ -0.96
LDHA-220ENST00000542179 H3BM21 787 aa9.03□□□□□ -0.96
LDHA-220ENST00000542179 TNFRSF10CO14798 259 aa9.03□□□□□ -0.96
LDHA-220ENST00000542179 SUPT7LO94864 414 aa9.03□□□□□ -0.96
LDHA-220ENST00000542179 S100BP04271 92 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms