RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 TBC1D15Q8TC07 691 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 IRF7Q92985 503 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 BBS2Q9BXC9 721 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF106Q9H2Y7 1883 aaKnown RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 PRRC2BQ5JSZ5 2229 aaKnown RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 HMGCLP35914 325 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 LCP2Q13094 533 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 ADGRD2Q7Z7M1 963 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 OR2AP1Q8NGE2 309 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 POLR1BQ9H9Y6 1135 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 INTS7Q9NVH2 962 aaKnown RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 GALPQ9UBC7 116 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 HS3ST2Q9Y278 367 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 XYLBO75191 536 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 RPS9P46781 194 aaKnown RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 UFM1P61960 85 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 ADARB1P78563 741 aaKnown RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 PLCL1Q15111 1095 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 CDKN3Q16667 212 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 OGFOD2Q6N063 350 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 KCTD8Q6ZWB6 473 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF554Q86TJ5 538 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 OR2T11Q8NH01 316 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF420Q8TAQ5 688 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 MAGEE2Q8TD90 523 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 MYLIPQ8WY64 445 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 PLEKHG4BQ96PX9 1271 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 GPR63Q9BZJ6 419 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 SPHK2Q9NRA0 654 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 FAM50BQ9Y247 325 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 WNT6Q9Y6F9 365 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 B4GAT1O43505 415 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 NDUFS3O75489 264 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 IGSF6O95976 241 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 TRBC1P01850 177 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 RB1P06400 928 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 TYRP14679 529 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 NFYCQ13952 458 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 ZRANB3Q5FWF4 1079 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 KCTD14Q9BQ13 255 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 TFB2MQ9H5Q4 396 aaKnown RBP16.86■□□□□ 0.29
SPIDR-227ENST00000541342 POPDC3Q9HBV1 291 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
SPIDR-227ENST00000541342 SZT2Q5T011 3432 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 IMPDH2P12268 514 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 IL12AP29459 219 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 XKR7Q5GH72 579 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 LY6G5CQ5SRR4 150 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 DHRSXQ8N5I4 330 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 SOCS5O75159 536 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 EEDO75530 441 aaKnown RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 HOXB8P17481 243 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 CA5AP35218 305 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 HNF1BP35680 557 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 AGTR2P50052 363 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 ILF2Q12905 390 aaKnown RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 FXNQ16595 210 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 SPATS1Q496A3 300 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 CTSL3PQ5NE16 218 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 UGT3A1Q6NUS8 523 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 XKR5Q6UX68 686 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 METTL3Q86U44 580 aaKnown RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 RBM12BQ8IXT5 1001 aaKnown RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 ADGRG2Q8IZP9 1017 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 LEMD2Q8NC56 503 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 ITFG1Q8TB96 612 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 LRRC3BQ96PB8 259 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 MTIF3Q9H2K0 278 aaKnown RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 ATP13A3Q9H7F0 1226 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 NTN4Q9HB63 628 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 PKP3Q9Y446 797 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 V9GYQ6 96 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 GAPDHSO14556 408 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 KERAO60938 352 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 HNRNPCP07910 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 RPS6KA2Q15349 733 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 PTPRNQ16849 979 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 C22orf39Q6P5X5 142 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 PAQR3Q6TCH7 311 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 CCDC97Q96F63 343 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-227ENST00000541342 SLCO3A1Q9UIG8 710 aa16.85■□□□□ 0.29
SPIDR-227ENST00000541342 UPK1AO00322 258 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 RHOBTB1O94844 696 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 RPS17P08708 135 aaKnown RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 PABPC1P11940 636 aaKnown RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 FCGR1AP12314 374 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 MAPK8P45983 427 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 MRPL19P49406 292 aaKnown RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 TMEM215Q68D42 235 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 NANOGP8Q6NSW7 305 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 RAB44Q7Z6P3 723 aaPredicted RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 SYVN1Q86TM6 617 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 ADIPOR2Q86V24 386 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 KIAA1191Q96A73 305 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 ISG20Q96AZ6 181 aaKnown RBP16.84■□□□□ 0.29
SPIDR-227ENST00000541342 PPP1R14BQ96C90 147 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 PIF1Q9H611 641 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 NANOGQ9H9S0 305 aa16.84■□□□□ 0.29
SPIDR-227ENST00000541342 ANAPC2Q9UJX6 822 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms