RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 DMTF1Q9Y222 760 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 MYOCOSA0A1B0GUC4 107 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 SUPT3HB4E1H0 165 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 SUPT3HO75486 399 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 SUPT7LO94864 414 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 TSPAN8P19075 237 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 HTR4Q13639 388 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 APOFQ13790 326 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ACOX1Q15067 660 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 AAK1Q2M2I8 961 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 FBXO48Q5FWF7 155 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 MTSS1LQ765P7 747 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 DET1Q7L5Y6 550 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 STON2Q8WXE9 905 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 ABTB1Q969K4 478 aaPredicted RBP16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 MARK4Q96L34 752 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 EFCAB1Q9HAE3 211 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 COQ6Q9Y2Z9 468 aa16.78■□□□□ 0.28
PCDHB17P-201ENST00000539533 IGLV3-16A0A075B6K0 115 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 NCF1BA6NI72 391 aaPredicted RBP16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 NCF1CA8MVU1 366 aaPredicted RBP16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 FADS2P1A8MWK0 482 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 TMEM233B4DJY2 109 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 SLCO1B7G3V0H7 640 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 ACOT8O14734 319 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 JUNP05412 331 aaKnown RBP16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 GFAPP14136 432 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 NCF1P14598 390 aaPredicted RBP16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 NFKB2Q00653 900 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 UNC50Q53HI1 259 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 HENMT1Q5T8I9 393 aaKnown RBP16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 CACUL1Q86Y37 369 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 CHPFQ8IZ52 775 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 ULK4Q96C45 1275 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 L3HYPDHQ96EM0 354 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 GSTO2Q9H4Y5 243 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 TNFRSF12AQ9NP84 129 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 EPS15L1Q9UBC2 864 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 STON1Q9Y6Q2 735 aa16.77■□□□□ 0.28
PCDHB17P-201ENST00000539533 ATG2BQ96BY7 2078 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 ADRB3P13945 408 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 PSMD8P48556 350 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 CDH13P55290 713 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 DCDC1P59894 354 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 HERVK_113P63132 956 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 COL19A1Q14993 1142 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 ZNF648Q5T619 568 aaPredicted RBP16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 FAM219BQ5XKK7 198 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 TMEM102Q8N9M5 508 aaPredicted RBP16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 ERVK-6Q9BXR3 956 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 SUN2Q9UH99 717 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 TICRRQ7Z2Z1 1910 aa16.77■□□□□ 0.27
PCDHB17P-201ENST00000539533 ANKRD12Q6UB98 2062 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 ANHXE9PGG2 379 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 AREL1O15033 823 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 HK3P52790 923 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 SEC13P55735 322 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 CREB5Q02930 508 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 TXNDC11Q6PKC3 985 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 ZBTB2Q8N680 514 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 CSGALNACT1Q8TDX6 532 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 PDLIM5Q96HC4 596 aaKnown RBP16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 NECTIN4Q96NY8 510 aa16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 UTP6Q9NYH9 597 aaKnown RBP16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 COPG1Q9Y678 874 aaKnown RBP16.76■□□□□ 0.27
PCDHB17P-201ENST00000539533 K7EQS6 105 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 UBFD1O14562 309 aaKnown RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 AKT1P31749 480 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 TMED1Q13445 227 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 PAOXQ6QHF9 649 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 NUDT18Q6ZVK8 323 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 PELI3Q8N2H9 469 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 FBXO39Q8N4B4 442 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 TRAM1L1Q8N609 369 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 ZNF513Q8N8E2 541 aaPredicted RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 AP2M1Q96CW1 435 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 PPP1R16AQ96I34 528 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 NPAS2Q99743 824 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 DYRK4Q9NR20 520 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 BLOC1S6Q9UL45 172 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 PLXNA2O75051 1894 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 ARHGAP10A1A4S6 786 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 PPP6CO00743 305 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 WNT9AO14904 365 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 RNASEH2AO75792 299 aaKnown RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 TCN1P20061 433 aaPredicted RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 TIE1P35590 1138 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 ERN2Q76MJ5 926 aaKnown RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 NSUN5Q96P11 429 aaKnown RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 ZSCAN5AQ9BUG6 496 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 MRPL1Q9BYD6 325 aaKnown RBP16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 SMOXQ9NWM0 555 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 CD207Q9UJ71 328 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 FIS1Q9Y3D6 152 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 PCDHGA4Q9Y5G9 962 aa16.75■□□□□ 0.27
PCDHB17P-201ENST00000539533 SYCE1LA8MT33 242 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 MMP20O60882 483 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms