RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 B4GALNT1Q00973 533 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 KCNC4Q03721 635 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 C18orf21Q32NC0 220 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GPRC6AQ5T6X5 926 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GDPD4Q6W3E5 623 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 USP45Q70EL2 814 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 RBM23Q86U06 439 aaKnown RBP10.56□□□□□ -0.72
CLIP1-210ENST00000538120 FAM110BQ8TC76 370 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 CYB5D2Q8WUJ1 264 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 EME1Q96AY2 570 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 B4GALT6Q9UBX8 382 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 CRLS1Q9UJA2 301 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF106Q9H2Y7 1883 aaKnown RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 TTC34A8MYJ7 566 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 PLOD2O00469 737 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 E2F3O00716 465 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 TPPPO94811 219 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 CAPNS1P04632 268 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 RALGDSQ12967 914 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 GRB7Q14451 532 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 DHCR24Q15392 516 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 ATP13A5Q4VNC0 1218 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 KRT77Q7Z794 578 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 CHERPQ8IWX8 916 aaKnown RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 MYO1HQ8N1T3 1032 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 C12orf76Q8N812 135 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 OTUB2Q96DC9 234 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 SLC29A1Q99808 456 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 MTG2Q9H4K7 406 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 EFCAB1Q9HAE3 211 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 NUDT4Q9NZJ9 180 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 CD274Q9NZQ7 290 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 EPS15L1Q9UBC2 864 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 EIF2B4Q9UI10 523 aaKnown RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 PSMD12O00232 456 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 FBP2O00757 339 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF197O14709 1029 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 GPC4O75487 556 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 TRIM16O95361 564 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 PSMC3P17980 439 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 GPX3P22352 226 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 ATP4BP51164 291 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 NR1H2P55055 460 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 TCEAL5Q5H9L2 206 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 CHPFQ8IZ52 775 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF557Q8N988 423 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 HGH1Q9BTY7 390 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 HTATIP2Q9BUP3 242 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 ZDHHC3Q9NYG2 299 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 GMPR2Q9P2T1 348 aaKnown RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 MBD1Q9UIS9 605 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 BLOC1S6Q9UL45 172 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 BTRCQ9Y297 605 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 MRPS23Q9Y3D9 190 aaKnown RBP10.55□□□□□ -0.72
CLIP1-210ENST00000538120 TIMM22Q9Y584 194 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 ST14Q9Y5Y6 855 aa10.55□□□□□ -0.72
CLIP1-210ENST00000538120 MYO7AQ13402 2215 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 E7ENX8 843 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 SNX2O60749 519 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 ESRRBO95718 433 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CYP17A1P05093 508 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CA3P07451 260 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CTSLP07711 333 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 LINC00032P0C843 101 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 POLR2EP19388 210 aaKnown RBP10.54□□□□□ -0.72
CLIP1-210ENST00000538120 SPINT3P49223 89 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CDH15P55291 814 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 FASTKQ14296 549 aaKnown RBP10.54□□□□□ -0.72
CLIP1-210ENST00000538120 AGKQ53H12 422 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 DUS1LQ6P1R4 473 aaKnown RBP10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CYP2R1Q6VVX0 501 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 C12orf40Q86WS4 652 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 TMEM126BQ8IUX1 230 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CATSPER1Q8NEC5 780 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 OR9I1Q8NGQ6 314 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 DLG3Q92796 817 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 ABTB1Q969K4 478 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-210ENST00000538120 SLCO4A1Q96BD0 722 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 ASIC4Q96FT7 647 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 SPSB2Q99619 263 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 CCT7Q99832 543 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 ABCG8Q9H221 673 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 LATS2Q9NRM7 1088 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 ELOVL2Q9NXB9 296 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 POLG2Q9UHN1 485 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 PCDHGA7Q9Y5G6 932 aa10.54□□□□□ -0.72
CLIP1-210ENST00000538120 IGLV3-16A0A075B6K0 115 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 TAPBPO15533 448 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 MLYCDO95822 493 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 WEE1P30291 646 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 VIPR2P41587 438 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 NAA20P61599 178 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 CREB5Q02930 508 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 LRP8Q14114 963 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PCBP2Q15366 365 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 MTX3Q5HYI7 312 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms