RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 TAS2R14Q9NYV8 317 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 APEX2Q9UBZ4 518 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 FZD10Q9ULW2 581 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 NPIPA1Q9UND3 350 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 WDR37Q9Y2I8 494 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 HS3ST3B1Q9Y662 390 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 COLEC10Q9Y6Z7 277 aa8.84□□□□□ -0.99
USP28-205ENST00000537706 OR5H15A6NDH6 313 aa8.84□□□□□ -1
USP28-205ENST00000537706 C2CD4BA6NLJ0 364 aa8.84□□□□□ -1
USP28-205ENST00000537706 USP27XA6NNY8 438 aa8.84□□□□□ -1
USP28-205ENST00000537706 EIF3CLB5ME19 914 aaKnown RBP8.84□□□□□ -1
USP28-205ENST00000537706 EEF2KO00418 725 aaKnown RBP8.84□□□□□ -1
USP28-205ENST00000537706 ZSCAN9O15535 394 aaPredicted RBP8.84□□□□□ -1
USP28-205ENST00000537706 KLK8O60259 260 aa8.84□□□□□ -1
USP28-205ENST00000537706 TOXO94900 526 aa8.84□□□□□ -1
USP28-205ENST00000537706 BMP10O95393 424 aa8.84□□□□□ -1
USP28-205ENST00000537706 ACPPP15309 386 aa8.84□□□□□ -1
USP28-205ENST00000537706 SOX11P35716 441 aa8.84□□□□□ -1
USP28-205ENST00000537706 RAB28P51157 221 aa8.84□□□□□ -1
USP28-205ENST00000537706 ITKQ08881 620 aa8.84□□□□□ -1
USP28-205ENST00000537706 SLC10A7Q0GE19 358 aa8.84□□□□□ -1
USP28-205ENST00000537706 GALNT3Q14435 633 aa8.84□□□□□ -1
USP28-205ENST00000537706 SLC5A12Q1EHB4 618 aa8.84□□□□□ -1
USP28-205ENST00000537706 ZNF766Q5HY98 468 aa8.84□□□□□ -1
USP28-205ENST00000537706 ZNF648Q5T619 568 aaPredicted RBP8.84□□□□□ -1
USP28-205ENST00000537706 ZNF658Q5TYW1 1059 aaPredicted RBP8.84□□□□□ -1
USP28-205ENST00000537706 CHSY3Q70JA7 882 aa8.84□□□□□ -1
USP28-205ENST00000537706 AMZ2Q86W34 360 aa8.84□□□□□ -1
USP28-205ENST00000537706 CDC20BQ86Y33 519 aa8.84□□□□□ -1
USP28-205ENST00000537706 DOLPP1Q86YN1 238 aa8.84□□□□□ -1
USP28-205ENST00000537706 C3orf20Q8ND61 904 aa8.84□□□□□ -1
USP28-205ENST00000537706 OR11G2Q8NGC1 345 aa8.84□□□□□ -1
USP28-205ENST00000537706 GLYATL1Q969I3 302 aa8.84□□□□□ -1
USP28-205ENST00000537706 COX4I2Q96KJ9 171 aa8.84□□□□□ -1
USP28-205ENST00000537706 NSMCE3Q96MG7 304 aa8.84□□□□□ -1
USP28-205ENST00000537706 EIF3CQ99613 913 aaKnown RBP8.84□□□□□ -1
USP28-205ENST00000537706 SARGQ9BW04 601 aa8.84□□□□□ -1
USP28-205ENST00000537706 ZNF160Q9HCG1 818 aa8.84□□□□□ -1
USP28-205ENST00000537706 BEX4Q9NWD9 120 aaPredicted RBP8.84□□□□□ -1
USP28-205ENST00000537706 TEKT2Q9UIF3 430 aa8.84□□□□□ -1
USP28-205ENST00000537706 ADAM21Q9UKJ8 722 aa8.84□□□□□ -1
USP28-205ENST00000537706 PRRC2CQ9Y520 2896 aaKnown RBP8.84□□□□□ -1
USP28-205ENST00000537706 NSG1A0A0A6YYJ2 146 aa8.83□□□□□ -1
USP28-205ENST00000537706 FAM237AA0A1B0GTK4 181 aa8.83□□□□□ -1
USP28-205ENST00000537706 CNOT3O75175 753 aaKnown RBP8.83□□□□□ -1
USP28-205ENST00000537706 GPD1P21695 349 aa8.83□□□□□ -1
USP28-205ENST00000537706 PPP1R2P41236 205 aa8.83□□□□□ -1
USP28-205ENST00000537706 NSG1P42857 185 aa8.83□□□□□ -1
USP28-205ENST00000537706 PMP22Q01453 160 aa8.83□□□□□ -1
USP28-205ENST00000537706 C2CD6Q53TS8 623 aa8.83□□□□□ -1
USP28-205ENST00000537706 GJB7Q6PEY0 223 aa8.83□□□□□ -1
USP28-205ENST00000537706 TRIM65Q6PJ69 517 aa8.83□□□□□ -1
USP28-205ENST00000537706 GBP6Q6ZN66 633 aa8.83□□□□□ -1
USP28-205ENST00000537706 OVCH1Q7RTY7 1134 aa8.83□□□□□ -1
USP28-205ENST00000537706 ZZZ3Q8IYH5 903 aa8.83□□□□□ -1
USP28-205ENST00000537706 TRAM1L1Q8N609 369 aa8.83□□□□□ -1
USP28-205ENST00000537706 CPSF7Q8N684 471 aaKnown RBP8.83□□□□□ -1
USP28-205ENST00000537706 ARMC2Q8NEN0 867 aa8.83□□□□□ -1
USP28-205ENST00000537706 BRIX1Q8TDN6 353 aaKnown RBP8.83□□□□□ -1
USP28-205ENST00000537706 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.83□□□□□ -12e-7■■■■■ 62.8
USP28-205ENST00000537706 ZCCHC2Q9C0B9 1178 aaKnown RBP8.83□□□□□ -1
USP28-205ENST00000537706 DHCR7Q9UBM7 475 aaKnown RBP8.83□□□□□ -1
USP28-205ENST00000537706 MKL2Q9ULH7 1088 aa8.83□□□□□ -1
USP28-205ENST00000537706 PSMD13Q9UNM6 376 aa8.83□□□□□ -1
USP28-205ENST00000537706 HEBP2Q9Y5Z4 205 aa8.83□□□□□ -1
USP28-205ENST00000537706 ACANP16112 2415 aa8.82□□□□□ -1
USP28-205ENST00000537706 ASNA1O43681 348 aa8.82□□□□□ -1
USP28-205ENST00000537706 CRLF1O75462 422 aa8.82□□□□□ -1
USP28-205ENST00000537706 WDPCPO95876 746 aa8.82□□□□□ -1
USP28-205ENST00000537706 ST6GAL1P15907 406 aa8.82□□□□□ -1
USP28-205ENST00000537706 ALAS2P22557 587 aa8.82□□□□□ -1
USP28-205ENST00000537706 CES1P23141 567 aa8.82□□□□□ -1
USP28-205ENST00000537706 MMP13P45452 471 aa8.82□□□□□ -1
USP28-205ENST00000537706 NDUFA8P51970 172 aa8.82□□□□□ -1
USP28-205ENST00000537706 PMS1P54277 932 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 ARSFP54793 590 aa8.82□□□□□ -1
USP28-205ENST00000537706 RPL26P61254 145 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 TFF3Q07654 80 aa8.82□□□□□ -1
USP28-205ENST00000537706 OLIG2Q13516 323 aa8.82□□□□□ -1
USP28-205ENST00000537706 VWA3BQ502W6 1294 aa8.82□□□□□ -1
USP28-205ENST00000537706 MARC1Q5VT66 337 aa8.82□□□□□ -1
USP28-205ENST00000537706 HIBCHQ6NVY1 386 aaPredicted RBP8.82□□□□□ -1
USP28-205ENST00000537706 CNSTQ6PJW8 725 aa8.82□□□□□ -1
USP28-205ENST00000537706 C3P1Q6ZMU1 363 aa8.82□□□□□ -1
USP28-205ENST00000537706 CDHR3Q6ZTQ4 885 aa8.82□□□□□ -1
USP28-205ENST00000537706 P3H2Q8IVL5 708 aa8.82□□□□□ -1
USP28-205ENST00000537706 ZNF655Q8N720 491 aaPredicted RBP8.82□□□□□ -1
USP28-205ENST00000537706 OR4E2Q8NGC2 313 aa8.82□□□□□ -1
USP28-205ENST00000537706 GDAP1Q8TB36 358 aa8.82□□□□□ -1
USP28-205ENST00000537706 BRSK1Q8TDC3 778 aa8.82□□□□□ -1
USP28-205ENST00000537706 PPM1MQ96MI6 270 aa8.82□□□□□ -1
USP28-205ENST00000537706 PWWP2AQ96N64 755 aa8.82□□□□□ -1
USP28-205ENST00000537706 WDR24Q96S15 920 aa8.82□□□□□ -1
USP28-205ENST00000537706 SELENOOQ9BVL4 669 aa8.82□□□□□ -1
USP28-205ENST00000537706 UCK2Q9BZX2 261 aa8.82□□□□□ -1
USP28-205ENST00000537706 SRMSQ9H3Y6 488 aa8.82□□□□□ -1
USP28-205ENST00000537706 KIR3DX1Q9H7L2 352 aa8.82□□□□□ -1
USP28-205ENST00000537706 NLRC4Q9NPP4 1024 aa8.82□□□□□ -1
USP28-205ENST00000537706 SLC24A2Q9UI40 661 aa8.82□□□□□ -1
USP28-205ENST00000537706 RPL26L1Q9UNX3 145 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms