RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 HABP4Q5JVS0 413 aaKnown RBP15.35■□□□□ 0.05
MKS1-204ENST00000537529 PLEKHS1Q5SXH7 462 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 TMEM215Q68D42 235 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 MBOAT1Q6ZNC8 495 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 DET1Q7L5Y6 550 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 LRRC70Q7Z2Q7 622 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 GALNT13Q8IUC8 556 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 DPP10Q8N608 796 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 NAT16Q8N8M0 369 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 DNAJB14Q8TBM8 379 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 FRS2Q8WU20 508 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 CYB5D2Q8WUJ1 264 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 MRGPRX3Q96LB0 322 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 ZBTB18Q99592 522 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 KCTD14Q9BQ13 255 aaPredicted RBP15.35■□□□□ 0.05
MKS1-204ENST00000537529 FAM83DQ9H4H8 585 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 TMPRSS11EQ9UL52 423 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 PDE10AQ9Y233 779 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 CCL27Q9Y4X3 112 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 AP4B1Q9Y6B7 739 aa15.35■□□□□ 0.05
MKS1-204ENST00000537529 TTC34A8MYJ7 566 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 MANBAO00462 879 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 ARPC2O15144 300 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 ULK1O75385 1050 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 LEFTY1O75610 366 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 SLC2A4P14672 509 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 GSK3BP49841 420 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 RPL38P63173 70 aaKnown RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 LIPEQ05469 1076 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 HSPA14Q0VDF9 509 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 GRM2Q14416 872 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 IMPG1Q17R60 797 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 GRASPQ7Z6J2 395 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 SKA2Q8WVK7 121 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 ZSWIM3Q96MP5 696 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 SLC12A9Q9BXP2 914 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 ALG2Q9H553 416 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 SLC32A1Q9H598 525 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 PARVBQ9HBI1 364 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 CCM2LQ9NUG4 571 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 RNF11Q9Y3C5 154 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 DHRS12A0PJE2 317 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 ARNTLO00327 626 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 SLC16A5O15375 505 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 AP2A2O94973 939 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 CLDN9O95484 217 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 HIST1H2AGP0C0S8 130 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 CEBPBP17676 345 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 HIST1H2ADP20671 130 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 XPAP23025 273 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 PSMA4P25789 261 aaKnown RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 GGT5P36269 586 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 RFTN2Q52LD8 501 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 ARSIQ5FYB1 569 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 RABL3Q5HYI8 236 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 UGT2A3Q6UWM9 527 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 TRIM46Q7Z4K8 759 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 HSD11B1LQ7Z5J1 315 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 CANT1Q8WVQ1 401 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 MYLIPQ8WY64 445 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 ING5Q8WYH8 240 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 PPWD1Q96BP3 646 aaKnown RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 TIFAQ96CG3 184 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 HIST1H2AHQ96KK5 128 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 GBP5Q96PP8 586 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 HIST1H2AJQ99878 128 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 H2AFJQ9BTM1 129 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 SEMA6AQ9H2E6 1030 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 PCDH12Q9NPG4 1184 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 NFKBIL1Q9UBC1 381 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 IL36AQ9UHA7 158 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 EGFL7Q9UHF1 273 aa15.34■□□□□ 0.05
MKS1-204ENST00000537529 ZNF490Q9ULM2 529 aaPredicted RBP15.34■□□□□ 0.05
MKS1-204ENST00000537529 MTCL1Q9Y4B5 1905 aaKnown RBP15.33■□□□□ 0.04
MKS1-204ENST00000537529 LOC730098B7Z3J9 87 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 ANKRD28O15084 1053 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 ARHGEF15O94989 841 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 KRT6AP02538 564 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 KRT6BP04259 564 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 ASLP04424 464 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 CYP2A7P20853 494 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 IL10P22301 178 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 VARSP26640 1264 aaKnown RBP15.33■□□□□ 0.04
MKS1-204ENST00000537529 KRT6CP48668 564 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 HNMTP50135 292 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
MKS1-204ENST00000537529 BOP1Q14137 746 aaKnown RBP15.33■□□□□ 0.04
MKS1-204ENST00000537529 AASDHQ4L235 1098 aaPredicted RBP15.33■□□□□ 0.04
MKS1-204ENST00000537529 TBCELQ5QJ74 424 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 CACHD1Q5VU97 1274 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 SLC2A7Q6PXP3 512 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 ERMP1Q7Z2K6 904 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 PTRH1Q86Y79 214 aaKnown RBP15.33■□□□□ 0.04
MKS1-204ENST00000537529 SPPL2CQ8IUH8 684 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 KIAA2013Q8IYS2 634 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 TRAM1L1Q8N609 369 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 ANKFN1Q8N957 763 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 PHOSPHO2Q8TCD6 241 aa15.33■□□□□ 0.04
MKS1-204ENST00000537529 WFIKKN2Q8TEU8 576 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms