RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TFAP4Q01664 338 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 DMPKQ09013 629 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 PLA2G7Q13093 441 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 SLC25A30Q5SVS4 291 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 CPSF7Q8N684 471 aaKnown RBP4.16□□□□□ -1.74
CCDC7-208ENST00000537047 OR5AP2Q8NGF4 316 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 TBC1D16Q8TBP0 767 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 C1orf74Q96LT6 269 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 PAG1Q9NWQ8 432 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 THEGQ9P2T0 379 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 CRYL1Q9Y2S2 319 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 IGLV3-10A0A075B6K4 115 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 ATP1A3P13637 1013 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 PRG2P13727 222 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 CDC25CP30307 473 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 BSGP35613 385 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 GOLGA8DPQ0D2H9 430 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 PNRC1Q12796 327 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-208ENST00000537047 ELAVL2Q12926 359 aaKnown RBP4.15□□□□□ -1.75
CCDC7-208ENST00000537047 EIF4A2Q14240 407 aaKnown RBP4.15□□□□□ -1.75
CCDC7-208ENST00000537047 ACSM2BQ68CK6 577 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 FAM109BQ6ICB4 259 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-208ENST00000537047 CFAP77Q6ZQR2 320 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 HPS6Q86YV9 775 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 DIS3L2Q8IYB7 885 aaKnown RBP4.15□□□□□ -1.75
CCDC7-208ENST00000537047 LSMEM2Q8N112 164 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 TSPYL6Q8N831 410 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 TRIM6Q9C030 488 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-208ENST00000537047 PREBQ9HCU5 417 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 PNMA2Q9UL42 364 aa4.15□□□□□ -1.75
CCDC7-208ENST00000537047 IGHV3OR16-10A0A075B7F0 116 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 MED19A0JLT2 244 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-208ENST00000537047 ELOVL7A1L3X0 281 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 PLEKHD1A6NEE1 506 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 KPNA7A9QM74 516 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 KLF11O14901 512 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 ACADMP11310 421 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 CASP6P55212 293 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 GSDMDP57764 484 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 INTS11Q5TA45 600 aaKnown RBP4.14□□□□□ -1.75
CCDC7-208ENST00000537047 ABCA7Q8IZY2 2146 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 ZNF519Q8TB69 540 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 ETNPPLQ8TBG4 499 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 FAM81BQ96LP2 452 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 SDR39U1Q9NRG7 319 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-208ENST00000537047 FBXL17Q9UF56 701 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 RARRES3Q9UL19 164 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 PPP1R3CQ9UQK1 317 aa4.14□□□□□ -1.75
CCDC7-208ENST00000537047 PRRC2AP48634 2157 aaKnown RBP4.13□□□□□ -1.75
CCDC7-208ENST00000537047 SRRM5B3KS81 715 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 IDH3BO43837 385 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 MAGEC1O60732 1142 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 GPC4O75487 556 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 PRKRAO75569 313 aaKnown RBP4.13□□□□□ -1.75
CCDC7-208ENST00000537047 PPM1FP49593 454 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-208ENST00000537047 RPS3AP61247 264 aaKnown RBP4.13□□□□□ -1.75
CCDC7-208ENST00000537047 ZSCAN23Q3MJ62 389 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 GRTP1Q5TC63 336 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-208ENST00000537047 Q6ZR54 194 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 Q8NBF4 154 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 RASL10AQ92737 203 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 SLCO2A1Q92959 643 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 OR2A14Q96R47 310 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 USP28Q96RU2 1077 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 DNAJC18Q9H819 358 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 SPHK2Q9NRA0 654 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 MAN1B1Q9UKM7 699 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 KLF2Q9Y5W3 355 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-208ENST00000537047 LYVE1Q9Y5Y7 322 aa4.13□□□□□ -1.75
CCDC7-208ENST00000537047 TO15178 435 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 NDUFS4O43181 175 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 C22orf31O95567 290 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 EIF2S1P05198 315 aaKnown RBP4.12□□□□□ -1.75
CCDC7-208ENST00000537047 CYP2A7P20853 494 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 LEPRP48357 1165 aaKnown RBP4.12□□□□□ -1.75
CCDC7-208ENST00000537047 PGFP49763 221 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 FIP1L1Q6UN15 594 aaKnown RBP4.12□□□□□ -1.75
CCDC7-208ENST00000537047 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 VN1R1Q9GZP7 353 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 PLK3Q9H4B4 646 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 HHATLQ9HCP6 504 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 MUTYHQ9UIF7 546 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 PCDHGA5Q9Y5G8 931 aa4.12□□□□□ -1.75
CCDC7-208ENST00000537047 ZNF646O15015 1829 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-208ENST00000537047 GH2P01242 217 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 IGHV3-13P01766 116 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 DUX4L4P0CJ87 422 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 PTGER3P43115 390 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 CCR9P51686 369 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 GSCP56915 257 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-208ENST00000537047 PRKCZQ05513 592 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 PAX8Q06710 450 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 CALCOCO2Q13137 446 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 RARS2Q5T160 578 aaKnown RBP4.11□□□□□ -1.75
CCDC7-208ENST00000537047 BTN2A1Q7KYR7 527 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 GALNT5Q7Z7M9 940 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 FAM114A1Q8IWE2 563 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 ZPLD1Q8TCW7 415 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms