RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ABHD16BQ9H3Z7 469 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 SMARCAD1Q9H4L7 1026 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 EHD1Q9H4M9 534 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 SP140LQ9H930 580 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 LIN28AQ9H9Z2 209 aaKnown RBP6.52□□□□□ -1.37
USP28-202ENST00000535607 CYP3A43Q9HB55 503 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 HPS4Q9NQG7 708 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 DIABLOQ9NR28 239 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 SMYD2Q9NRG4 433 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 SNX15Q9NRS6 342 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 INTS10Q9NVR2 710 aaKnown RBP6.52□□□□□ -1.37
USP28-202ENST00000535607 RNF186Q9NXI6 227 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 TMEM216Q9P0N5 145 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 RCOR3Q9P2K3 495 aaPredicted RBP6.52□□□□□ -1.37
USP28-202ENST00000535607 NDUFAF1Q9Y375 327 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 HEY1Q9Y5J3 304 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 RAD54BQ9Y620 910 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 HTTP42858 3142 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 PCNTO95613 3336 aa6.52□□□□□ -1.37
USP28-202ENST00000535607 CNTNAP2Q9UHC6 1331 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 A0A087X1B8 175 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 A0A1W2PPW3 197 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 WDR27A2RRH5 827 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 FAM171A2A8MVW0 826 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 EVPLLA8MZ36 301 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 M0R3G1 203 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 RNF103O00237 685 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 MRASO14807 208 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 TRIM24O15164 1050 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 UBDO15205 165 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 SEC14L2O76054 403 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 SORBS2O94875 1100 aaKnown RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 ABLIM3O94929 683 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 IL18RAPO95256 599 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 PIGNO95427 931 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 GSRP00390 522 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 KRT8P05787 483 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 PGK2P07205 417 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 VDRP11473 427 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 MYCLP12524 364 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 PDGFRAP16234 1089 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 KCNA2P16389 499 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 NFKBIAP25963 317 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 IL1R2P27930 398 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 SDC4P31431 198 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 NPY2RP49146 381 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 TPD52P55327 224 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 PER3P56645 1201 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 DEFA1P59665 94 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 DEFA3P59666 94 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 UBXN2AP68543 259 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 MS4A2Q01362 244 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 DLX2Q07687 328 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 RIPPLY1Q0D2K3 151 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 CDC20Q12834 499 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ADAM15Q13444 863 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 SLC12A1Q13621 1099 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 GK3PQ14409 553 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ATP6AP1Q15904 470 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 KYAT1Q16773 422 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 PHKG1Q16816 387 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 DCAF6Q58WW2 860 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 XKR3Q5GH77 459 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 MTX3Q5HYI7 312 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ZNF667Q5HYK9 610 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 GLRA4Q5JXX5 417 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 VWA5B1Q5TIE3 1220 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 TTC23Q5W5X9 447 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 CES4AQ5XG92 561 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 TXNRD3NBQ6F5E7 133 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 SLC39A4Q6P5W5 647 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 METTL7BQ6UX53 244 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 USP30Q70CQ3 517 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 TFAP2DQ7Z6R9 452 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ADCK1Q86TW2 530 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ZNF761Q86XN6 746 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 XYLT1Q86Y38 959 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ANKRD13BQ86YJ7 626 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 LACC1Q8IV20 430 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 PSTKQ8IV42 348 aaKnown RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 MMAAQ8IVH4 418 aaKnown RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 CCDC60Q8IWA6 550 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 BRSK2Q8IWQ3 736 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 PEX5LQ8IYB4 626 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 LRRC56Q8IYG6 542 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 KIAA2013Q8IYS2 634 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 PARP8Q8N3A8 854 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ZCCHC7Q8N3Z6 543 aaKnown RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 AADATQ8N5Z0 425 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 GLB1L3Q8NCI6 653 aaPredicted RBP6.51□□□□□ -1.37
USP28-202ENST00000535607 PIK3C3Q8NEB9 887 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ZNF555Q8NEP9 628 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 OR13F1Q8NGS4 319 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 CXorf38Q8TB03 319 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 URGCPQ8TCY9 931 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 VMP1Q96GC9 406 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 SPATA13Q96N96 652 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 ASB2Q96Q27 587 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 OR52B2Q96RD2 323 aa6.51□□□□□ -1.37
USP28-202ENST00000535607 TRMOQ9BU70 441 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms