RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ADAM2Q99965 735 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 DGCR6LQ9BY27 220 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 P2RY12Q9H244 342 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 IKZF5Q9H5V7 419 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 RETREG1Q9H6L5 497 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 PAK1IP1Q9NWT1 392 aaPredicted RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 E5RI56 91 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 F5H5T6 163 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 GNGT2O14610 69 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 CNPP09543 421 aaKnown RBP16.33■□□□□ 0.2
CTSB-228ENST00000533455 ITGAMP11215 1152 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 PTGER3P43115 390 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 RPL38P63173 70 aaKnown RBP16.33■□□□□ 0.2
CTSB-228ENST00000533455 PIGFQ07326 219 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 MAD2L1Q13257 205 aaPredicted RBP16.33■□□□□ 0.2
CTSB-228ENST00000533455 LAPTM5Q13571 262 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 RUNDC3AQ59EK9 446 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 SPRYD7Q5W111 196 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 PLPP6Q8IY26 295 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 MICU2Q8IYU8 434 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 LGI2Q8N0V4 545 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 OR7D4Q8NG98 312 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 S100ZQ8WXG8 99 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 HBEGFQ99075 208 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 DCAF13Q9NV06 445 aaKnown RBP16.33■□□□□ 0.2
CTSB-228ENST00000533455 ASIC5Q9NY37 505 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 SLC25A37Q9NYZ2 338 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 CPA4Q9UI42 421 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 UTS2RQ9UKP6 389 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 EIF3LQ9Y262 564 aaKnown RBP16.33■□□□□ 0.2
CTSB-228ENST00000533455 DGKBQ9Y6T7 804 aa16.33■□□□□ 0.2
CTSB-228ENST00000533455 FRMPD3Q5JV73 1810 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 TRBV5-3A0A0A0MS03 114 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 FAM220BPB1ANY3 271 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 TMEM189-UBE2V1I3L0A0 370 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 M0QX08 132 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 HS6ST1O60243 411 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 B4GALT3O60512 393 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 PRKD3O94806 890 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 INMTO95050 263 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 S100BP04271 92 aaPredicted RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 ARL1P40616 181 aaPredicted RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 PON2Q15165 354 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 MAPKAPK3Q16644 382 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 C18orf21Q32NC0 220 aaPredicted RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 ZRANB3Q5FWF4 1079 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 LDLRAP1Q5SW96 308 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 ANKRD34AQ69YU3 496 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 SBSNQ6UWP8 590 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 TMEM179BQ7Z7N9 219 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 LPCAT1Q8NF37 534 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 FAR1Q8WVX9 515 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 SMIM14Q96QK8 99 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 THUMPD3Q9BV44 507 aaKnown RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 TRIT1Q9H3H1 467 aaKnown RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 SCUBE2Q9NQ36 999 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 EVLQ9UI08 416 aaPredicted RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 DAPK2Q9UIK4 370 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
CTSB-228ENST00000533455 DHRS7Q9Y394 339 aa16.32■□□□□ 0.2
CTSB-228ENST00000533455 KRBA1A5PL33 1030 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 RGS14O43566 566 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 KDELR3O43731 214 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 XYLBO75191 536 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
CTSB-228ENST00000533455 IL6P05231 212 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 AKR1A1P14550 325 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 SLC2A4P14672 509 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 RAD23AP54725 363 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 PLIN5Q00G26 463 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 PLA2G4EQ3MJ16 856 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 ATG9BQ674R7 924 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 PIWIL3Q7Z3Z3 882 aaKnown RBP16.31■□□□□ 0.2
CTSB-228ENST00000533455 HIPK1Q86Z02 1210 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 DCP2Q8IU60 420 aaKnown RBP16.31■□□□□ 0.2
CTSB-228ENST00000533455 STK40Q8N2I9 435 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 ZNF408Q9H9D4 720 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 ATAD3AQ9NVI7 634 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 SLC28A1O00337 649 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 SLC22A1O15245 554 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 GLUD1P00367 558 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 ACVR2AP27037 513 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 HPCAL1P37235 193 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 KPNA1P52294 538 aaPredicted RBP16.31■□□□□ 0.2
CTSB-228ENST00000533455 OXCT1P55809 520 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 TAF10Q12962 218 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 PTGR1Q14914 329 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 FAM174BQ3ZCQ3 159 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 CXCL17Q6UXB2 119 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 MILR1Q7Z6M3 343 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 CALHM3Q86XJ0 350 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 CHPFQ8IZ52 775 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 CFAP52Q8N1V2 620 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 TTC9BQ8N6N2 239 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 DNAJB8Q8NHS0 232 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 PSD2Q9BQI7 771 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms