RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 IL6P05231 212 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 SLC2A4P14672 509 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 NCK1P16333 377 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 AKT1P31749 480 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 CA5AP35218 305 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 GNPDA1P46926 289 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ALDH3B2P48448 385 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 DGKKQ5KSL6 1271 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 CACHD1Q5VU97 1274 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 USP45Q70EL2 814 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 BBS7Q8IWZ6 715 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 DNAJB8Q8NHS0 232 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ZNF296Q8WUU4 475 aaPredicted RBP16.89■□□□□ 0.29
BRCA2-204ENST00000530893 SLC13A3Q8WWT9 602 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 GPBP1L1Q9HC44 474 aaPredicted RBP16.89■□□□□ 0.29
BRCA2-204ENST00000530893 TSR3Q9UJK0 312 aaKnown RBP16.89■□□□□ 0.29
BRCA2-204ENST00000530893 TRAV19A0A0A6YYK7 116 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 A0A1W2PQ67 120 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 CCDC160A6NGH7 325 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 PDLIM1O00151 329 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 GMNNO75496 209 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 BMP10O95393 424 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 ANXA5P08758 320 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 GKP32189 559 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 PPM1AP35813 382 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
BRCA2-204ENST00000530893 RPL38P63173 70 aaKnown RBP16.88■□□□□ 0.29
BRCA2-204ENST00000530893 HABP4Q5JVS0 413 aaKnown RBP16.88■□□□□ 0.29
BRCA2-204ENST00000530893 CRTC1Q6UUV9 634 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 USP7Q93009 1102 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 ULK4Q96C45 1275 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 ASIC4Q96FT7 647 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 MCCC1Q96RQ3 725 aaPredicted RBP16.88■□□□□ 0.29
BRCA2-204ENST00000530893 COPS8Q99627 209 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 SH3GL1Q99961 368 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 CPEB1Q9BZB8 566 aaKnown RBP16.88■□□□□ 0.29
BRCA2-204ENST00000530893 TNKS2Q9H2K2 1166 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 HS3ST2Q9Y278 367 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 LTBP2Q14767 1821 aa16.88■□□□□ 0.29
BRCA2-204ENST00000530893 NPIPB15A6NHN6 443 aaPredicted RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 TRIM64CA6NLI5 447 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 STK16O75716 305 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 SRCP12931 536 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 CD70P32970 193 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 GGT5P36269 586 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 CYP4F8P98187 520 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 FKBP9P1Q75LS8 142 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 ZSWIM9Q86XI8 627 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 TCAIMQ8N3R3 496 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 GPR26Q8NDV2 337 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 BPIFB1Q8TDL5 484 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 PPM1MQ96MI6 270 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 HBEGFQ99075 208 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 GORASP2Q9H8Y8 452 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 SMPD3Q9NY59 655 aaPredicted RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 INTS6Q9UL03 887 aaKnown RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 PIKFYVEQ9Y2I7 2098 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 A0A087WXM4 84 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 TRIM64A6NGJ6 449 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 LILRB3O75022 631 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 ANXA6P08133 673 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 CDH2P19022 906 aaPredicted RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 GGT1P19440 569 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 RPS9P46781 194 aaKnown RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 OR4D2P58180 307 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 TLE2Q04725 743 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 IMPG1Q17R60 797 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 TMC8Q8IU68 726 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 FAM9CQ8IZT9 166 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 ADAMTS16Q8TE57 1224 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 AUTS2Q8WXX7 1259 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 POP5Q969H6 163 aaKnown RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 CHID1Q9BWS9 393 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 ZNF490Q9ULM2 529 aaPredicted RBP16.87■□□□□ 0.29
BRCA2-204ENST00000530893 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
BRCA2-204ENST00000530893 IGLV3-16A0A075B6K0 115 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 PLOD2O00469 737 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 EI24O14681 340 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 CLDN9O95484 217 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 KRT6AP02538 564 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 LRG1P02750 347 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 KRT6BP04259 564 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 RAP2AP10114 183 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 KRT6CP48668 564 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 MAPKAPK3Q16644 382 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 TMEM259Q4ZIN3 620 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 FAM98BQ52LJ0 330 aaKnown RBP16.86■□□□□ 0.29
BRCA2-204ENST00000530893 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 LRRC66Q68CR7 880 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 TTC33Q6PID6 262 aaPredicted RBP16.86■□□□□ 0.29
BRCA2-204ENST00000530893 TSPAN33Q86UF1 283 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 RIMKLAQ8IXN7 391 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 OR52E4Q8NGH9 312 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 MPP4Q96JB8 637 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 LMLNQ96KR4 655 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 ZNF641Q96N77 438 aaPredicted RBP16.86■□□□□ 0.29
BRCA2-204ENST00000530893 DPY30Q9C005 99 aa16.86■□□□□ 0.29
BRCA2-204ENST00000530893 CEP44Q9C0F1 390 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms