RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RUVBL1Q9Y265 456 aaKnown RBP14.8□□□□□ -0.04
USP47-207ENST00000527733 A0A1W2PP55 124 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 GSC2O15499 205 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 GRID2O43424 1007 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 ENTPD5O75356 428 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 IRAK1BP1Q5VVH5 260 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 LRRC70Q7Z2Q7 622 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 DSELQ8IZU8 1212 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 LINC01599Q8WXQ3 324 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 SCRN2Q96FV2 425 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 ABHD8Q96I13 439 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 HIC2Q96JB3 615 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 PPM1MQ96MI6 270 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 REEP1Q9H902 201 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 FANCEQ9HB96 536 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 PIAS3Q9Y6X2 628 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 MAGEA13PA6NCF6 341 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 MAN2B1O00754 1011 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 NTSR1P30989 418 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 ARSDP51689 593 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 MAPK12P53778 367 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 NDUFA9Q16795 377 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 FGD3Q5JSP0 725 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 C16orf62Q7Z3J2 963 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 CYP2U1Q7Z449 544 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 ANKRD27Q96NW4 1050 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 C3orf14Q9HBI5 128 aa14.8□□□□□ -0.04
USP47-207ENST00000527733 FAM47E-STBD1D6RA91 191 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 ITM2AO43736 263 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 TYROBPO43914 113 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 ALDOAP04075 364 aaKnown RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 PRDX6P30041 224 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 RPS21P63220 83 aaKnown RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 CAPRIN2Q6IMN6 1127 aaKnown RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 OR2T12Q8NG77 320 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 HM13Q8TCT9 377 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 KHSRPQ92945 711 aaKnown RBP eCLIP14.79□□□□□ -0.041e-6■■□□□ 14
USP47-207ENST00000527733 LMLNQ96KR4 655 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 MYCBPQ99417 103 aaPredicted RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 ENOPH1Q9UHY7 261 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 TMEM98Q9Y2Y6 226 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 COQ6Q9Y2Z9 468 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 QSER1Q2KHR3 1735 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 OR1I1O60431 355 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 MTERF1Q99551 399 aaKnown RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 EBF4Q9BQW3 602 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 PLEKHS1Q5SXH7 462 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 TERB1Q8NA31 727 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 OR4A15Q8NGL6 344 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 SMPDL3AQ92484 453 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 CLIP3Q96DZ5 547 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 SEMA3GQ9NS98 782 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 DLGAP2Q9P1A6 1054 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 MARCH4Q9P2E8 410 aaPredicted RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 DNMT3BQ9UBC3 853 aaKnown RBP14.79□□□□□ -0.04
USP47-207ENST00000527733 SDK1Q7Z5N4 2213 aa14.79□□□□□ -0.04
USP47-207ENST00000527733 HNRNPCL2B2RXH8 293 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 LILRB3O75022 631 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 TNFP01375 233 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 F11P03951 625 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 MAGEA6P43360 314 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 TGFBIQ15582 683 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 PLD6Q8N2A8 252 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 TADA1Q96BN2 335 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 CD207Q9UJ71 328 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 SLC22A14Q9Y267 594 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 TOP3BO95985 862 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 ATP6V1B1P15313 513 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 BUD31P41223 144 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 CLCN4P51793 760 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 SLC16A1P53985 500 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 STXBP1P61764 594 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 NFKB2Q00653 900 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 LACTB2Q53H82 288 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 PRAMEF14Q5SWL7 426 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 C9orf64Q5T6V5 341 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 PRAMEF13Q5VWM6 474 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 SLC30A9Q6PML9 568 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 FBXW8Q8N3Y1 598 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 CHST14Q8NCH0 376 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 C10orf82Q8WW14 230 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 MRPS30Q9NP92 439 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 KRT84Q9NSB2 600 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 OR10H1Q9Y4A9 318 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 ACTL7AQ9Y615 435 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 H3BQ06 376 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 ALPPL2P10696 532 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 RPS14P62263 151 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 SP140Q13342 867 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 KDELC1Q6UW63 502 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 GLB1L3Q8NCI6 653 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 CDK15Q96Q40 435 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 TMEM79Q9BSE2 394 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 EGFL7Q9UHF1 273 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 KCNK6Q9Y257 313 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 TRIM43BA6NCK2 446 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 OAS1P00973 400 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 SLC6A2P23975 617 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms