RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 ELMO2Q96JJ3 720 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 FERD3LQ96RJ6 166 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 GPR87Q9BY21 358 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 SRMSQ9H3Y6 488 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 LATS2Q9NRM7 1088 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 KCND1Q9NSA2 647 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 FAM8A1Q9UBU6 413 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 LNPEPQ9UIQ6 1025 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 CROTQ9UKG9 612 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 BTRCQ9Y297 605 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 CCL22O00626 93 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 LIN7AO14910 233 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 MAP3K7O43318 606 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 MSL3P1P0C860 447 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 EBLN1P0CF75 366 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 PRKAR1AP10644 381 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 F8A1P23610 371 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 MSNP26038 577 aaKnown RBP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 OAS2P29728 719 aaKnown RBP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 PPARGP37231 505 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 RPS6KA1Q15418 735 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 DBN1Q16643 649 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 DUS1LQ6P1R4 473 aaKnown RBP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 PACS1Q6VY07 963 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 CERS6Q6ZMG9 384 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 ZNF662Q6ZS27 426 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 NLRP9Q7RTR0 991 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 PIANPQ8IYJ0 282 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 CLDN19Q8N6F1 224 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 NAT14Q8WUY8 206 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 TFGQ92734 400 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN1-207ENST00000527189 RANBP9Q96S59 729 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 ETNK1Q9HBU6 452 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 SMARCAL1Q9NZC9 954 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
CAPN1-207ENST00000527189 E7EVH7 732 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 CREG1O75629 220 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 WISP1O95388 367 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 IFNB1P01574 187 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 FTH1P02794 183 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 POLR2CP19387 275 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 ADRA1DP25100 572 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 PDHA2P29803 388 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 PRDX3P30048 256 aaKnown RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 LMAN1P49257 510 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 KPNA2P52292 529 aaKnown RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 ACVR1Q04771 509 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 SEMA5AQ13591 1074 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 DNASE1L3Q13609 305 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 BOP1Q14137 746 aaKnown RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 KCNAB1Q14722 419 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 CCNG2Q16589 344 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 DEFB109BQ30KR1 87 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 C16orf46Q6P387 395 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 C4orf22Q6V702 233 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 OR52K1Q8NGK4 314 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 ATG4AQ8WYN0 398 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 ZNF501Q96CX3 271 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 LRFN5Q96NI6 719 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 FANCEQ9HB96 536 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 PAK5Q9P286 719 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 POLG2Q9UHN1 485 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 DRG1Q9Y295 367 aaKnown RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.33
CAPN1-207ENST00000527189 TLN1Q9Y490 2541 aaKnown RBP13.02□□□□□ -0.33
CAPN1-207ENST00000527189 CCDC162PA2VCL2 907 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 AP3B1O00203 1094 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
CAPN1-207ENST00000527189 KATNA1O75449 491 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 SCRG1O75711 98 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 TIAF1O95411 115 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 OR56A5P0C7T3 313 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 PRSS56P0CW18 603 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 CDH3P22223 829 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 FOXN2P32314 431 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 CSRP3P50461 194 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 TSTD2Q5T7W7 516 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 PPP1R21Q6ZMI0 780 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 ZNF517Q6ZMY9 492 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-207ENST00000527189 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 TBC1D21Q8IYX1 336 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 CCDC89Q8N998 374 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 OR52E1Q8NGJ3 308 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 OR13J1Q8NGT2 312 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 C9orf43Q8TAL5 461 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-207ENST00000527189 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 HDAC10Q969S8 669 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 PITPNM3Q9BZ71 974 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 CASS4Q9NQ75 786 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 RAB6BQ9NRW1 208 aa13.01□□□□□ -0.33
CAPN1-207ENST00000527189 PIH1D1Q9NWS0 290 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms