RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PTRH2Q9Y3E5 179 aaKnown RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 PKP3Q9Y446 797 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 COPG1Q9Y678 874 aaKnown RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 ARL5AQ9Y689 179 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SEC16AO15027 2179 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 UTP20O75691 2785 aaKnown RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 TEX15Q9BXT5 2789 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 RELNP78509 3460 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 LOC285095A0A1B0GVY8 99 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 BTN3A1O00481 513 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PPP1R12AO14974 1030 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 PJA2O43164 708 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 CST8O60676 142 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 KCNJ13O60928 360 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 CEACAM4O75871 244 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 DDAH2O95865 285 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 LDLRP01130 860 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 RAB40ALP0C0E4 278 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 SLC35G4P0C7Q5 338 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PRSS56P0CW18 603 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 AGXTP21549 392 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 ALAS2P22557 587 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PDHA2P29803 388 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 RORAP35398 523 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 HMGCLP35914 325 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 MAGEA1P43355 309 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 TNNT3P45378 269 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 CDKN1CP49918 316 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 HADHBP55084 474 aaKnown RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 ADCY2Q08462 1091 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 SLC1A5Q15758 541 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PAPD7Q5XG87 772 aaKnown RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 SP5Q6BEB4 398 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 SPOCD1Q6ZMY3 1216 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 CDHR3Q6ZTQ4 885 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 MED25Q71SY5 747 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 KMT5CQ86Y97 462 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PARP9Q8IXQ6 854 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 IQCKQ8N0W5 287 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 ZNF567Q8N184 647 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 C2orf73Q8N5S3 287 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 ZNF655Q8N720 491 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 TMEM102Q8N9M5 508 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 DDHD1Q8NEL9 900 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 OR13C4Q8NGS5 318 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 OR2L2Q8NH16 312 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 TFB1MQ8WVM0 346 aaKnown RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 SEC14L1Q92503 715 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 INPP5DQ92835 1189 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PNPLA2Q96AD5 504 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 DCUN1D1Q96GG9 259 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 C5orf34Q96MH7 638 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 OLFM3Q96PB7 478 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 TRAPPC9Q96Q05 1148 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 CD180Q99467 661 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 HGH1Q9BTY7 390 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 HEMGNQ9BXL5 484 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 ILKAPQ9H0C8 392 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 GOLPH3Q9H4A6 298 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 KIR3DX1Q9H7L2 352 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 FANCEQ9HB96 536 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 FAM60AQ9NP50 221 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 SPTLC3Q9NUV7 552 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 DHCR7Q9UBM7 475 aaKnown RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 CIDEBQ9UHD4 219 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 GPN3Q9UHW5 284 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 ACSL5Q9ULC5 683 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 PLAGL1Q9UM63 463 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 OSGIN2Q9Y236 505 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 KLHL20Q9Y2M5 609 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 CSAG2Q9Y5P2 127 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 DNMT3AQ9Y6K1 912 aaPredicted RBP6.38□□□□□ -1.39
CD44-221ENST00000526000 COLEC10Q9Y6Z7 277 aa6.38□□□□□ -1.39
CD44-221ENST00000526000 BSNQ9UPA5 3926 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 SHANK1Q9Y566 2161 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 PIKFYVEQ9Y2I7 2098 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 CCDC78A2IDD5 438 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 GOLGA6L9A6NEM1 432 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 C9J4A7 227 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 E7EQ34 232 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 H7C0C1 242 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 PEX12O00623 359 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 LRRTM2O43300 516 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZSCAN12O43309 604 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 MAP3K7O43318 606 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 SGTAO43765 313 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 CNOT3O75175 753 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 PRAMEF1O95521 474 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 SNRPB2P08579 225 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 CCDC175P0C221 793 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 PRF1P14222 555 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZFXP17010 805 aaPredicted RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 TPH1P17752 444 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 COMTP21964 271 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ARHGAP25P42331 645 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ATP5OP48047 213 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms