RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 IPO8O15397 1037 aaKnown RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 KCNN4O15554 427 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 TMCC2O75069 709 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 BBOX1O75936 387 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 OR2C1O95371 312 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 LINC00271P0C7V0 271 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 POLR2CP19387 275 aaPredicted RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 NR2F2P24468 414 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 CORO1AP31146 461 aaKnown RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 FASLGP48023 281 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 LMAN1P49257 510 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 GPR143P51810 404 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 TERF1P54274 439 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 RRP1P56182 461 aaKnown RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 CD81P60033 236 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 RPS8P62241 208 aaKnown RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 EEF1A1P68104 462 aaKnown RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 COG7P83436 770 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PPP2R2BQ00005 443 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 KIF5AQ12840 1032 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 DECR1Q16698 335 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 ASTE1Q2TB18 679 aaPredicted RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 RAB41Q5JT25 222 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PLEKHS1Q5SXH7 462 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 EEF1A1P5Q5VTE0 462 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 ZDHHC20Q5W0Z9 365 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 ZNF280DQ6N043 979 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 TRNP1Q6NT89 227 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 SPSB3Q6PJ21 355 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PCGF5Q86SE9 256 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 EXOC3L1Q86VI1 746 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 TICAM2Q86XR7 235 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 CHERPQ8IWX8 916 aaKnown RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 ODF3L1Q8IXM7 274 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 APPL2Q8NEU8 664 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 SECTM1Q8WVN6 248 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PIGTQ969N2 578 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 TAAR8Q969N4 342 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PPP1R13BQ96KQ4 1090 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 EPYCQ99645 322 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 IL25Q9H293 177 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 LRMDAQ9H2I8 198 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 RAD21L1Q9H4I0 556 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 MAGIXQ9H6Y5 334 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 MTMR10Q9NXD2 777 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 C1RLQ9NZP8 487 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 SUCLA2Q9P2R7 463 aaPredicted RBP3.77□□□□□ -1.81
CD44-219ENST00000525685 RPS6KA6Q9UK32 745 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 ARAP2Q8WZ64 1704 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 WDR90Q96KV7 1748 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PSME4Q14997 1843 aa3.77□□□□□ -1.81
CD44-219ENST00000525685 PRSS47A8MTI9 375 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ANKRD28O15084 1053 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SMAD9O15198 467 aaKnown RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 PPIP5K2O43314 1243 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 UFL1O94874 794 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 UBTFL1P0CB47 393 aaPredicted RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 PORP16435 677 aaPredicted RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 S1PR1P21453 382 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 HOXA13P31271 388 aaPredicted RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 USP8P40818 1118 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 EIF2DP41214 584 aaKnown RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 SLC15A1P46059 708 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ISL1P61371 349 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 MRPS5P82675 430 aaKnown RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 PLIN5Q00G26 463 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SLC20A2Q08357 652 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 COASYQ13057 564 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 IRF3Q14653 427 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 MEP1AQ16819 746 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 IGSF11Q5DX21 431 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 C20orf194Q5TEA3 1177 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 MFSD4BQ5TF39 518 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 TMEM198Q66K66 360 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 PMS2CLQ68D20 193 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 BRAT1Q6PJG6 821 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 PRSS57Q6UWY2 283 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 Q6ZTC4 211 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 C16orf82Q7Z2V1 217 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ARMC9Q7Z3E5 817 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 KMT5CQ86Y97 462 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ITPRIPQ8IWB1 547 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SCYL3Q8IZE3 742 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 RASGEF1CQ8N431 466 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SLC5A8Q8N695 610 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 MAB21L3Q8N8X9 362 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 POC5Q8NA72 575 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ACVR1CQ8NER5 493 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 LMO3Q8TAP4 145 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 TBC1D16Q8TBP0 767 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SLC20A1Q8WUM9 679 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SLC38A5Q8WUX1 472 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ABTB1Q969K4 478 aaPredicted RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 NSUN4Q96CB9 384 aaKnown RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 RHBDF1Q96CC6 855 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 RSRC1Q96IZ7 334 aaKnown RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 FEM1CQ96JP0 617 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 EGLN2Q96KS0 407 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 NEUROD6Q96NK8 337 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 IL17FQ96PD4 163 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms