RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 OR6C74A6NCV1 312 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR5K3A6NET4 321 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF839A8K0R7 811 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 IQCF5A8MTL0 148 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 A8MU76 341 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 C2orf74A8MZ97 194 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 C1QTNF9BB2RNN3 333 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 E7ESA3 106 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 TOX3O15405 576 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CAPN5O15484 640 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 RRP8O43159 456 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 BRINP1O60477 761 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 NIPSNAP2O75323 286 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 BANF1O75531 89 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLCO2B1O94956 709 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 TNFSF15O95150 251 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 S1PR4O95977 384 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CATP04040 527 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ITGA2BP08514 1039 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 GSTA2P09210 222 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ANKRD34CP0C6C1 535 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 C1QTNF9P0C862 333 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CBSLP0DN79 551 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 THRAP10827 490 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ENO3P13929 434 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 MAP4P27816 1152 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 AOAHP28039 575 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PDHA2P29803 388 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCR7P32248 378 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 STX2P32856 288 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CSF2RBP32927 897 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PHBP35232 272 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CBSP35520 551 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SKIV2L2P42285 1042 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CARSP49589 748 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 MAPK10P53779 464 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC12A2P55011 1212 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCBP4P57723 403 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAB15P59190 212 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ERVPABLB-1P60509 514 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 MPP1Q00013 466 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC7A5Q01650 507 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZFP36L1Q07352 338 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CYP4F3Q08477 520 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRKG2Q13237 762 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PDAP1Q13442 181 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CUL1Q13616 776 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 TBC1D25Q3MII6 688 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 MSS51Q4VC12 460 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CTSL3PQ5NE16 218 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 TMTC4Q5T4D3 741 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CACHD1Q5VU97 1274 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 STEAP4Q687X5 459 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 DUS1LQ6P1R4 473 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 NAPRTQ6XQN6 538 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 LRRC69Q6ZNQ3 347 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CAPN12Q6ZSI9 719 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 MICALCLQ6ZW33 695 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 B3GNT8Q7Z7M8 397 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 GALNT7Q86SF2 657 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC26A11Q86WA9 606 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 AMIGO1Q86WK6 493 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 MARCH9Q86YJ5 346 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLITRK4Q8IW52 837 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 DCUN1D3Q8IWE4 304 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CNTN4Q8IWV2 1026 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CARFQ8N187 725 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 LILRA3Q8N6C8 439 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 GPATCH11Q8N954 259 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 C2CD4AQ8NCU7 369 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PHC3Q8NDX5 983 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR4E2Q8NGC2 313 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR52E1Q8NGJ3 308 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR5K2Q8NHB8 316 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO25Q8TCJ0 367 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 UBXN4Q92575 508 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 RSC1A1Q92681 617 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 N4BP2L2Q92802 583 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ART4Q93070 314 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM136AQ96C01 138 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 VPS39Q96JC1 886 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 C9orf72Q96LT7 481 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF578Q96N58 590 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CNTNAP3BQ96NU0 1288 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 LRRC1Q9BTT6 524 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 CNTNAP3Q9BZ76 1288 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 ASPSCR1Q9BZE9 553 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAB33BQ9H082 229 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SEMA6CQ9H3T2 930 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 FANCEQ9HB96 536 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 LATS2Q9NRM7 1088 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 WDR70Q9NW82 654 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 HRASLS2Q9NWW9 162 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SOHLH2Q9NX45 425 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 TAS2R13Q9NYV9 303 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 GRHL1Q9NZI5 618 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 KLHL42Q9P2K6 505 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 DKK4Q9UBT3 224 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 EPHA6Q9UF33 1036 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 LNPEPQ9UIQ6 1025 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms