RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PRF1P14222 555 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 IL9P15248 144 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PTPN1P18031 435 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TACR3P29371 465 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CRHR1P34998 444 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 IRS1P35568 1242 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ATP5C1P36542 298 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ALDH3B1P43353 468 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ALDH3B2P48448 385 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 NRIP1P48552 1158 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CSNK1DP48730 415 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CLCNKAP51800 687 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DGKQP52824 942 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CAPZA1P52907 286 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 C21orf59P57076 290 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 NCALDP61601 193 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 GALK2Q01415 458 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DPYDQ12882 1025 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SELENBP1Q13228 472 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 THOC5Q13769 683 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CAMK1Q14012 370 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CBX2Q14781 532 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ANGPT1Q15389 498 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TAF5Q15542 800 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SMAD1Q15797 465 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DDR2Q16832 855 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 WDR72Q3MJ13 1102 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 FLYWCH1Q4VC44 716 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 NOMO2Q5JPE7 1267 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 RALGPS1Q5JS13 557 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PLAC9Q5JTB6 97 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MANEAQ5SRI9 462 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SPATA46Q5T0L3 261 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PRAMEF20Q5VT98 475 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MLIPQ5VWP3 458 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ARHGAP17Q68EM7 881 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 HMBOX1Q6NT76 420 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 EMBQ6PCB8 327 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 IL20RBQ6UXL0 311 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 EFL1Q7Z2Z2 1120 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 HAUS6Q7Z4H7 955 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PPP1R3BQ86XI6 285 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CNGA4Q8IV77 575 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 NELFCDQ8IXH7 590 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PPIL6Q8IXY8 311 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SLC39A11Q8N1S5 342 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 KIF2BQ8N4N8 673 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CELF2-AS1Q8N7Q2 184 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 OR2L3Q8NG85 312 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TRUB1Q8WWH5 349 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PRPF31Q8WWY3 499 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 KLHL29Q96CT2 875 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MTFMTQ96DP5 389 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 APOPT1Q96IL0 206 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TPD52L3Q96J77 140 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PLEKHA8Q96JA3 519 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MSLNLQ96KJ4 702 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF597Q96LX8 424 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF285Q96NJ3 590 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 NECAB3Q96P71 396 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF184Q99676 751 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PELOQ9BRX2 385 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 FAM213AQ9BRX8 229 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DUSP26Q9BV47 211 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MFRPQ9BY79 579 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 GSDMCQ9BYG8 508 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 OPN3Q9H1Y3 402 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 RIBC2Q9H4K1 309 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CWH43Q9H720 699 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CBX8Q9HC52 389 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MCCC2Q9HCC0 563 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ASCL3Q9NQ33 180 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PCDHB16Q9NRJ7 776 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SLC38A7Q9NVC3 462 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SH3BP4Q9P0V3 963 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 EIF3KQ9UBQ5 218 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 BTNL2Q9UIR0 455 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 AP4E1Q9UPM8 1137 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DOLKQ9UPQ8 538 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 IRAK3Q9Y616 596 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MYH11P35749 1972 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 FAM149AA5PLN7 773 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CCDC154A6NI56 674 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 MEI4A8MW99 385 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 BTBD18B2RXH4 712 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 KCNJ18B7U540 433 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NPIPA2E9PIF3 369 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 LOC110117498-PIK3R3F6TDL0 507 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 H0YAE9 185 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NUPL2O15504 423 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 SEC14L5O43304 696 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 RHBDL1O75783 438 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 S100A8P05109 93 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CRYGCP07315 174 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 COX4I1P13073 169 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CCNB1P14635 433 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NR1D1P20393 614 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 COL9A1P20849 921 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms