RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 PAPD5Q8NDF8 572 aaKnown RBP10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RMND5BQ96G75 393 aaPredicted RBP10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LMLNQ96KR4 655 aa10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TMEM45AQ9NWC5 275 aa10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CCL26Q9Y258 94 aa10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MYRFQ9Y2G1 1151 aa10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CROCCQ5TZA2 2017 aa10.55□□□□□ -0.72
RAB11FIP1-204ENST00000522774 AGAP14A8MT82 685 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DFNA5O60443 496 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CLIC3O95833 236 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 NPPAP01160 153 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 VEGFBP49765 207 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PTSQ03393 145 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ARHGEF7Q14155 803 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MPP7Q5T2T1 576 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 GLYATQ6IB77 296 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TPRG1Q6ZUI0 275 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CBARPQ8N350 705 aaPredicted RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 UBTD2Q8WUN7 234 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PPP3R2Q96LZ3 170 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LYSMD1Q96S90 227 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 C9orf16Q9BUW7 83 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ADI1Q9BV57 179 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SLC46A2Q9BY10 475 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 VAPAQ9P0L0 249 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZNHIT2Q9UHR6 403 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZNF490Q9ULM2 529 aaPredicted RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LTBP2Q14767 1821 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 GRXCR2A6NFK2 248 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RASAL1O95294 804 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 EPORP19235 508 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CCR7P32248 378 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 GGT5P36269 586 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MERTKQ12866 999 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PWP1Q13610 501 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZXDCQ2QGD7 858 aaPredicted RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 C22orf39Q6P5X5 142 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RGL4Q8IZJ4 473 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 KRTCAP2Q8N6L1 136 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MYLIPQ8WY64 445 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MTFMTQ96DP5 389 aaKnown RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ASIC4Q96FT7 647 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SCRN2Q96FV2 425 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SUV39H2Q9H5I1 410 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZDHHC6Q9H6R6 413 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DYTNA2CJ06 578 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 KRT87PA6NCN2 255 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 H3BSA7 217 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MANBAO00462 879 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RGS14O43566 566 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ITGB8P26012 769 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SNRPD1P62314 119 aaKnown RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CRY1Q16526 586 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 FAM174BQ3ZCQ3 159 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 AASDHQ4L235 1098 aaPredicted RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TBPL2Q6SJ96 375 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SUSD1Q6UWL2 747 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DET1Q7L5Y6 550 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LIX1Q8N485 282 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CLHC1Q8NHS4 586 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ECHDC3Q96DC8 303 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 FBXL20Q96IG2 436 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MPP4Q96JB8 637 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RNF145Q96MT1 663 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TOX2Q96NM4 488 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 C19orf43Q9BQ61 176 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CHID1Q9BWS9 393 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SOX17Q9H6I2 414 aaPredicted RBP10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RDH14Q9HBH5 336 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZDHHC3Q9NYG2 299 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TMPRSS11EQ9UL52 423 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PCDHB3Q9Y5E6 796 aa10.54□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TRAV19A0A0A6YYK7 116 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ULK1O75385 1050 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LRG1P02750 347 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 UGT2B4P06133 528 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 C1SP09871 688 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 UMPSP11172 480 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 FCGR1AP12314 374 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 EPB42P16452 691 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MSH3P20585 1137 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CCR2P41597 374 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 NSG1P42857 185 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 WDR5P61964 334 aaKnown RBP10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SLC36A3Q495N2 470 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SPANXN4Q5MJ08 99 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TMTC4Q5T4D3 741 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DNAJC14Q6Y2X3 702 aaPredicted RBP10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DPY19L3Q6ZPD9 716 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PROSER1Q86XN7 944 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TBC1D21Q8IYX1 336 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SLC22A17Q8WUG5 538 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SLC13A3Q8WWT9 602 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 GTF2H4Q92759 462 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ULK4Q96C45 1275 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 NSMCE2Q96MF7 247 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZNF583Q96ND8 569 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms