RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ARMC3Q5W041 872 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TMEM214Q6NUQ4 689 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 C12orf76Q8N812 135 aaPredicted RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 SLC13A3Q8WWT9 602 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 DPF3Q92784 378 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 HIC2Q96JB3 615 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 HERC2P3Q9BVR0 1158 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ZCCHC2Q9C0B9 1178 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 FAM192AQ9GZU8 254 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 CWH43Q9H720 699 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ZDHHC4Q9NPG8 344 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 C1orf109Q9NX04 203 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 H3BM21 787 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 MAP3K13O43283 966 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 SOCS5O75159 536 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 LEFTY1O75610 366 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 F11P03951 625 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ACRV1P26436 265 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 GSSP48637 474 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ALDH9A1P49189 494 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RPL26P61254 145 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 TNK2Q07912 1038 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TRAP1Q12931 704 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 SPDYE7PQ495Y7 208 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 CTSL3PQ5NE16 218 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ZCCHC8Q6NZY4 707 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 CRTC1Q6UUV9 634 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RFLNAQ6ZTI6 216 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 SATL1Q86VE3 508 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 CMTR2Q8IYT2 770 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 GPR26Q8NDV2 337 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 LRCH3Q96II8 777 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 CEP295NLQ96MC4 621 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ZNF382Q96SR6 550 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 INTS7Q9NVH2 962 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 NDUFA13Q9P0J0 144 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RIMKLBQ9ULI2 386 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RAB26Q9ULW5 256 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 KCNE2Q9Y6J6 123 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 PRSS21Q9Y6M0 314 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TRIM24O15164 1050 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 CST1P01037 141 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 CTSAP10619 480 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 HLA-EP13747 358 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 MTHFD2P13995 350 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 ETV3P41162 512 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 KANK2Q63ZY3 851 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 GPR141Q7Z602 305 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 TMPRSS11BQ86T26 416 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 TRIM74Q86UV6 250 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 FIBINQ8TAL6 211 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 CLP1Q92989 425 aaKnown RBP9.96□□□□□ -0.81
MCF2-209ENST00000520602 TRMT2BQ96GJ1 504 aaKnown RBP9.96□□□□□ -0.81
MCF2-209ENST00000520602 MYRFLQ96LU7 910 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 MYOCQ99972 504 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 CHID1Q9BWS9 393 aa9.96□□□□□ -0.81
MCF2-209ENST00000520602 UPK3BL1B0FP48 263 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 UPK3BL2E5RIL1 263 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 PTGES3LE9PB15 166 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 FBP2O00757 339 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 VNN2O95498 520 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 ADH1CP00326 375 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 FGF4P08620 206 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 ATP1B2P14415 290 aaPredicted RBP9.96□□□□□ -0.82
MCF2-209ENST00000520602 HNF4AP41235 474 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 PREPP48147 710 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 CBLBQ13191 982 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 SLC5A9Q2M3M2 681 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 TCTN1Q2MV58 587 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 SPANXN4Q5MJ08 99 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 GET4Q7L5D6 327 aaPredicted RBP9.96□□□□□ -0.82
MCF2-209ENST00000520602 ADGRG6Q86SQ4 1221 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 TMEM151AQ8N4L1 468 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 ATL1Q8WXF7 558 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 FATE1Q969F0 183 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 THAP11Q96EK4 314 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 MPP4Q96JB8 637 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 ZFYVE19Q96K21 471 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 CD244Q9BZW8 370 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 SGK2Q9HBY8 427 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 OAZ3Q9UMX2 235 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 CCL26Q9Y258 94 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 ASF1AQ9Y294 204 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 SNX8Q9Y5X2 465 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 ATG13O75143 517 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 AQP1P29972 269 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 EIF4EBP2Q13542 120 aaPredicted RBP9.96□□□□□ -0.82
MCF2-209ENST00000520602 SPIDRQ14159 915 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 NANOGP8Q6NSW7 305 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 HID1Q8IV36 788 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 TBC1D21Q8IYX1 336 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 SLC43A3Q8NBI5 491 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 OR10Q1Q8NGQ4 319 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 SPPL2AQ8TCT8 520 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 BIRC8Q96P09 236 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 TRIB3Q96RU7 358 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 CGREF1Q99674 301 aa9.96□□□□□ -0.82
MCF2-209ENST00000520602 DCUN1D5Q9BTE7 237 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms