RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 C1QTNF5Q9BXJ0 243 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 STK33Q9BYT3 514 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 LHPPQ9H008 270 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FBXO44Q9H4M3 255 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 C12orf49Q9H741 205 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 BARX1Q9HBU1 254 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 APOBEC3GQ9HC16 384 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 WASH6PQ9NQA3 447 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CISHQ9NSE2 258 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SAMSN1Q9NSI8 373 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ACSS1Q9NUB1 689 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SPATS2LQ9NUQ6 558 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 TMEM30AQ9NV96 361 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FANCLQ9NW38 375 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 IL37Q9NZH6 218 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 MRPL15Q9P015 296 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 VPS18Q9P253 973 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ADAMTS6Q9UKP5 1117 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 AGO1Q9UL18 857 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 MYO6Q9UM54 1294 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 LRP2P98164 4655 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 A0A1B0GTH6 734 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 A0A1B0GTH9 108 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 WI2-2373I1.2A0A1W2PRP0 233 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 GOLGA6L9A6NEM1 432 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 IGLON5A6NGN9 336 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 GABRR3A8MPY1 467 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 LGALS16A8MUM7 142 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CASKO14936 926 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MDM4O15151 490 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SART1O43290 800 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CBFA2T2O43439 604 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MED7O43513 233 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CPNE3O75131 537 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 NDUFS7O75251 213 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 URI1O94763 535 aaPredicted RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PRAMEF1O95521 474 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SYF2O95926 243 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 KNG1P01042 644 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 TNFP01375 233 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 IVLP07476 585 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM200BP0CF97 657 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SETSIPP0DME0 302 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 UCHL3P15374 230 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF30P17039 623 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DPP4P27487 766 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CORO1AP31146 461 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 IGFALSP35858 605 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CDKN1AP38936 164 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ADH7P40394 386 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 RPL34P49207 117 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 LMAN1P49257 510 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 RAD23BP54727 409 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MTTPP55157 894 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 RPS4XP62701 263 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 VSNL1P62760 191 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CCDC15Q0P6D6 951 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SGCGQ13326 291 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MTA1Q13330 715 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SSPNQ14714 243 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 NR1I3Q14994 352 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 KRT31Q15323 416 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PLA2G4EQ3MJ16 856 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 FBXL19-AS1Q494R0 122 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MPPE1Q53F39 396 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 EMC4Q5J8M3 183 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MANEALQ5VSG8 457 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 KLHDC7AQ5VTJ3 777 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PM20D1Q6GTS8 502 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DPY19L2P1Q6NXN4 242 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 LCLAT1Q6UWP7 414 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ENPP7Q6UWV6 458 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 RAD9BQ6WBX8 426 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PAQR9Q6ZVX9 377 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 R3HCC1LQ7Z5L2 792 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 TADA2BQ86TJ2 420 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 OSTM1Q86WC4 334 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF677Q86XU0 584 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CILP2Q8IUL8 1156 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM71AQ8IYT1 594 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 FUKQ8N0W3 1084 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ARHGAP18Q8N392 663 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PPM1KQ8N3J5 372 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SVOPLQ8N434 492 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC4A11Q8NBS3 891 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 NOA1Q8NC60 698 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 OR10H5Q8NGA6 315 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CCL4L1Q8NHW4 92 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SUN3Q8TAQ9 357 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM71BQ8TC56 605 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ASB12Q8WXK4 309 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 OR8D1Q8WZ84 308 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 IRGQQ8WZA9 623 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SYN2Q92777 582 aaPredicted RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 TATDN2Q93075 761 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 KIAA1191Q96A73 305 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CYFIP2Q96F07 1278 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PDXPQ96GD0 296 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SMARCD1Q96GM5 515 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PCED1BQ96HM7 432 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms