RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 NKAIN1Q4KMZ8 207 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 FNBP1LQ5T0N5 605 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 RHBDD2Q6NTF9 364 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 MRPL14Q6P1L8 145 aaKnown RBP10.14□□□□□ -0.79
CLDND1-227ENST00000513452 XKRXQ6PP77 449 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 ISLR2Q6UXK2 745 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 FAM151BQ6UXP7 276 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 DET1Q7L5Y6 550 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 PROKR1Q8TCW9 393 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 LCN9Q8WX39 176 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 FATE1Q969F0 183 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 C14orf79Q96F83 325 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 RMDN2Q96LZ7 410 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 TAAR6Q96RI8 345 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 NRTNQ99748 197 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 TRIM56Q9BRZ2 755 aaKnown RBP10.14□□□□□ -0.79
CLDND1-227ENST00000513452 SYT11Q9BT88 431 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 AP1M1Q9BXS5 423 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 LHPPQ9H008 270 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 SPRTNQ9H040 489 aaPredicted RBP10.14□□□□□ -0.79
CLDND1-227ENST00000513452 TXLNGQ9NUQ3 528 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 MYO1AQ9UBC5 1043 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 CDC23Q9UJX2 597 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 NEU2Q9Y3R4 380 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 SPO11Q9Y5K1 396 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 AP1M2Q9Y6Q5 423 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 SCINQ9Y6U3 715 aa10.14□□□□□ -0.79
CLDND1-227ENST00000513452 NIPBLQ6KC79 2804 aaeCLIP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 BTN3A3O00478 584 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 ZSCAN9O15535 394 aaPredicted RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A9O60656 530 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 FERP16591 822 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A6P19224 532 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A1P22309 533 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A4P22310 534 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 MMP11P24347 488 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 KIR3DL1P43629 444 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 ART1P52961 327 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 ARG2P78540 354 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 ADORA2A-AS1P86434 159 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 SLC25A11Q02978 314 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 ZBTB17Q13105 803 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 MFAP5Q13361 173 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 PAFAH1B3Q15102 231 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 CDSNQ15517 529 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 PPP2R5EQ16537 467 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 LDLRAP1Q5SW96 308 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 C19orf47Q8N9M1 422 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 CCNYQ8ND76 341 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 DDHD1Q8NEL9 900 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 ACVR1CQ8NER5 493 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 NAT14Q8WUY8 206 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 MTFMTQ96DP5 389 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 THOC3Q96J01 351 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 NDC1Q9BTX1 674 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 CEP41Q9BYV8 373 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 XPO4Q9C0E2 1151 aaKnown RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A7Q9HAW7 530 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A10Q9HAW8 530 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 UGT1A8Q9HAW9 530 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 MCCC2Q9HCC0 563 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 FAM60AQ9NP50 221 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 IL26Q9NPH9 171 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 IRAK4Q9NWZ3 460 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
CLDND1-227ENST00000513452 COLEC10Q9Y6Z7 277 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 SEC16AO15027 2179 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 CNTRLQ7Z7A1 2325 aa10.13□□□□□ -0.79
CLDND1-227ENST00000513452 MGAT4DA6NG13 374 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 H3BMH7 237 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 SOCS6O14544 535 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 HCRTR1O43613 425 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 KLHL18O94889 574 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 FTLP02792 175 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-227ENST00000513452 POLBP06746 335 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 CTSBP07858 339 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 CCDC172P0C7W6 258 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 CD99P14209 185 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 AKT1P31749 480 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 GJC1P36383 396 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 SMSP52788 366 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 TMPRSS15P98073 1019 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 GBE1Q04446 702 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 DPYSL3Q14195 570 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 INAQ16352 499 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 TUBB8Q3ZCM7 444 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 CCDC183Q5T5S1 534 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 GPRC6AQ5T6X5 926 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 KIRREL2Q6UWL6 708 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 DAAM2Q86T65 1068 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 TRIM73Q86UV7 250 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 NT5DC3Q86UY8 548 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 HOOK3Q86VS8 718 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 LILRA3Q8N6C8 439 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-227ENST00000513452 ZNF655Q8N720 491 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-227ENST00000513452 CNTD1Q8N815 330 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 ANKRD20A12PQ8NF67 263 aa10.12□□□□□ -0.79
CLDND1-227ENST00000513452 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms