RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SMAD5Q99717 465 aaKnown RBP12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PITPNM3Q9BZ71 974 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 SLC29A3Q9BZD2 475 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 GBA3Q9H227 469 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 SRMSQ9H3Y6 488 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 ARNT2Q9HBZ2 717 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 SOHLH2Q9NX45 425 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 RSPH14Q9UHP6 348 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PADI2Q9Y2J8 665 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 A0A0U1RQJ8 604 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 CCDC66A2RUB6 948 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 ARGFXA6NJG6 315 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 DNAJB5O75953 348 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 AGTP01019 485 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 ATP1B2P14415 290 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 POLR2CP19387 275 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 CA5AP35218 305 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 ADRA1AP35348 466 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 PRLHRP49683 370 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 XIAPP98170 497 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 OTUD4Q01804 1114 aaKnown RBP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 SSPNQ14714 243 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 INPP5JQ15735 1006 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 GPR19Q15760 415 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 SNX20Q7Z614 316 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 RAB43Q86YS6 212 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 SLC38A9Q8NBW4 561 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 OR4K2Q8NGD2 314 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 PNPLA2Q96AD5 504 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 FER1L6-AS2Q96M78 137 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 SLAMF7Q9NQ25 335 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 PCMTD2Q9NV79 361 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 ARL5AQ9Y689 179 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 CFAP20Q9Y6A4 193 aaKnown RBP12.21□□□□□ -0.45
VEGFA-216ENST00000512683 AP1M2Q9Y6Q5 423 aa12.21□□□□□ -0.45
VEGFA-216ENST00000512683 SPTBN1Q01082 2364 aaKnown RBP12.21□□□□□ -0.46
VEGFA-216ENST00000512683 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 C9J4A7 227 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 H7C0C1 242 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 H7C0S8 307 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 QSOX1O00391 747 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 BUD23O43709 281 aaKnown RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 SGTAO43765 313 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 STK10O94804 968 aaKnown RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 POLBP06746 335 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 CAPN1P07384 714 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 ITGALP20701 1170 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 CYP2A7P20853 494 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 GNLYP22749 145 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 ATP5OP48047 213 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 ITGA1P56199 1179 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 RPS18P62269 152 aaKnown RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 PLOD1Q02809 727 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 IL10RAQ13651 578 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 JMJD6Q6NYC1 403 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 CERS6Q6ZMG9 384 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 DET1Q7L5Y6 550 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 NXPE1Q8N323 547 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 ENDOVQ8N8Q3 282 aaKnown RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 TCTN2Q96GX1 697 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 FERD3LQ96RJ6 166 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 FAM118BQ9BPY3 351 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 SLC7A5P2Q9GIP4 190 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 ZDHHC3Q9NYG2 299 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 PLEKHB1Q9UF11 243 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-216ENST00000512683 CRLS1Q9UJA2 301 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 PIKFYVEQ9Y2I7 2098 aa12.2□□□□□ -0.46
VEGFA-216ENST00000512683 IGLV3-16A0A075B6K0 115 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 E7EQ34 232 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 GPR39O43194 453 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 KDM1AO60341 852 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 IPO13O94829 963 aaKnown RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 AP2A2O94973 939 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 ALPPP05187 535 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 RBP3P10745 1247 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 PBLDP30039 288 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 CETN2P41208 172 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 PTGIRP43119 386 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 NAP1L1P55209 391 aaKnown RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 RWDD2BP57060 319 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 SOX8P57073 446 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 EIF3EP60228 445 aaKnown RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 OLIG2Q13516 323 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 PTPRCAPQ14761 206 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 NCF4Q15080 339 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 NADK2Q4G0N4 442 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 ZNF789Q5FWF6 425 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 ANKRD20A2Q5SQ80 823 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 CCDC181Q5TID7 509 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 ANKRD20A1Q5TYW2 823 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms