RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 KLHL4Q9C0H6 718 aa3.34□□□□□ -1.87
SSBP2-206ENST00000506960 SPATC1LQ9H0A9 340 aa3.34□□□□□ -1.87
SSBP2-206ENST00000506960 DENND2DQ9H6A0 471 aaPredicted RBP3.34□□□□□ -1.87
SSBP2-206ENST00000506960 ZNF334Q9HCZ1 680 aaPredicted RBP3.34□□□□□ -1.87
SSBP2-206ENST00000506960 MIOSQ9NXC5 875 aa3.34□□□□□ -1.87
SSBP2-206ENST00000506960 TRMT1Q9NXH9 659 aaKnown RBP3.34□□□□□ -1.87
SSBP2-206ENST00000506960 TAB2Q9NYJ8 693 aa3.34□□□□□ -1.87
SSBP2-206ENST00000506960 TAAR2Q9P1P5 351 aa3.34□□□□□ -1.87
SSBP2-206ENST00000506960 LARSQ9P2J5 1176 aaKnown RBP3.34□□□□□ -1.87
SSBP2-206ENST00000506960 MAGED1Q9Y5V3 778 aaPredicted RBP3.34□□□□□ -1.87
SSBP2-206ENST00000506960 AKNAQ7Z591 1439 aa3.34□□□□□ -1.88
SSBP2-206ENST00000506960 DENND4BO75064 1496 aaPredicted RBP3.34□□□□□ -1.88
SSBP2-206ENST00000506960 SYNMO15061 1565 aa3.34□□□□□ -1.88
SSBP2-206ENST00000506960 IQGAP1P46940 1657 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 ZC3H13Q5T200 1668 aaKnown RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 CDC42BPBQ9Y5S2 1711 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 KIDINS220Q9ULH0 1771 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 IPO8O15397 1037 aaKnown RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 APOHP02749 345 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 AMBPP02760 352 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 SERPINB2P05120 415 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 ABCB1P08183 1280 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 GM2AP17900 193 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 KRT20P35900 424 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 RAD52P43351 418 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 HOXA1P49639 335 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LIG4P49917 911 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 SIRPAP78324 504 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 RUNX1T1Q06455 604 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 TMEM266Q2M3C6 531 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 NDUFAF5Q5TEU4 345 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 KRT79Q5XKE5 535 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 DHRS7BQ6IAN0 325 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 PACS1Q6VY07 963 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 SLC26A9Q7LBE3 791 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LDB1Q86U70 411 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 MINDY1Q8N5J2 469 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LPGAT1Q92604 370 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 TAF15Q92804 592 aaKnown RBP eCLIP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 ERLEC1Q96DZ1 483 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 MTERF3Q96E29 417 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF582Q96NG8 517 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 SLF1Q9BQI6 1058 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LRRC1Q9BTT6 524 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 TRMT61BQ9BVS5 477 aaKnown RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 MRPL1Q9BYD6 325 aaKnown RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 WSB2Q9NYS7 404 aaPredicted RBP3.33□□□□□ -1.88
SSBP2-206ENST00000506960 YIPF1Q9Y548 306 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 FAM169AQ9Y6X4 670 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 C9orf84Q5VXU9 1444 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LRRC7Q96NW7 1537 aa3.33□□□□□ -1.88
SSBP2-206ENST00000506960 LOC102723996A0A087X1L8 192 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 hCG_1809904A0A1W2PP81 198 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 A0A1W2PPE2 198 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 A0A1W2PR64 198 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 A0A1W2PS18 150 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 OR2M5A3KFT3 312 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 MAGEB17A8MXT2 336 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ADAMDEC1O15204 470 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ADAM20O43506 726 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 PRAMEF11O60813 436 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 PDE9AO76083 593 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 PGM3O95394 542 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 LDLRP01130 860 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 LIPFP07098 398 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 TPOP07202 933 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 HSP90AA1P07900 732 aaKnown RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 CSF2RAP15509 400 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF23P17027 643 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 TRIM21P19474 475 aaKnown RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 TAF6P49848 677 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 HSD17B4P51659 736 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ATP12AP54707 1039 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 IFI35P80217 286 aaPredicted RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 MBTD1Q05BQ5 628 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GAGE2BQ13066 116 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 PRPF4BQ13523 1007 aaKnown RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GRAPQ13588 217 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 BECN1Q14457 450 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 MELKQ14680 651 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GAGE2EQ4V326 116 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GCNT6Q5T4J0 391 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 TMEM211Q6ICI0 200 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GAGE2AQ6NT46 116 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF852Q6ZMS4 543 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 AVL9Q8NBF6 648 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 RBM15BQ8NDT2 890 aaKnown RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 WDR20Q8TBZ3 569 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZFAND2BQ8WV99 257 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 SMPDL3BQ92485 455 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF622Q969S3 477 aaKnown RBP eCLIP3.32□□□□□ -1.883e-6■■□□□ 13.5
SSBP2-206ENST00000506960 PTERQ96BW5 349 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF501Q96CX3 271 aaPredicted RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 FBXO17Q96EF6 278 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ABHD8Q96I13 439 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 FAM81BQ96LP2 452 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF354BQ96LW1 612 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GCNAQ96QF7 691 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 FNDC11Q9BVV2 318 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms