RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CTSCP53634 463 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 GRAPQ13588 217 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 KLHL22Q53GT1 634 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 SPSB3Q6PJ21 355 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 ZNF704Q6ZNC4 412 aaPredicted RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 ASB18Q6ZVZ8 466 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TUBA1AQ71U36 451 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 INTS8Q75QN2 995 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 ZNF534Q76KX8 674 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 MEPCEQ7L2J0 689 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 ATG9AQ7Z3C6 839 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 LDB1Q86U70 411 aaPredicted RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 GCSAMQ8N6F7 178 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 RBMXL3Q8N7X1 1067 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 SLC38A9Q8NBW4 561 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 SEMA4DQ92854 862 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 SECISBP2LQ93073 1101 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 LINGO1Q96FE5 620 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TTC14Q96N46 770 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TUBA1CQ9BQE3 449 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 POLR3CQ9BUI4 534 aaPredicted RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 SPATC1LQ9H0A9 340 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 SLCO5A1Q9H2Y9 848 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 KCNK15Q9H427 330 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TRPC7Q9HCX4 862 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 PLSCR4Q9NRQ2 329 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TCP11L1Q9NUJ3 509 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 RCC2Q9P258 522 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 LARSQ9P2J5 1176 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 AMACRQ9UHK6 382 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TTLL3Q9Y4R7 772 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TRPM1Q7Z4N2 1603 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 COL22A1Q8NFW1 1626 aaPredicted RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 TOPAZ1Q8N9V7 1692 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 QRICH2Q9H0J4 1663 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 EIF3AQ14152 1382 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 PLEKHH1Q9ULM0 1364 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 ANKARQ7Z5J8 1434 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 USP32Q8NFA0 1604 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 LOC102723996A0A087X1L8 192 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 A0A1W2PP11 408 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 SMTNL1A8MU46 457 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 PRAC2D3DTV9 90 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 DVL1O14640 695 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 IPO8O15397 1037 aaKnown RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 TIMM44O43615 452 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 LDB3O75112 727 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 DNTTP04053 509 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 SNRNP70P08621 437 aaKnown RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 GABRA5P31644 462 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 FMO5P49326 533 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 FUT6P51993 359 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 ZNF132P52740 706 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 DVL1P1P54792 670 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 EEF1A1P68104 462 aaKnown RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 CXCL9Q07325 125 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 C15orf59Q2T9L4 293 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 LETM2Q2VYF4 491 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 EEF1A1P5Q5VTE0 462 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 GARNL3Q5VVW2 1013 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 KRT79Q5XKE5 535 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 TMEM211Q6ICI0 200 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 NAA16Q6N069 864 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 SLC30A6Q6NXT4 461 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 PLEKHM3Q6ZWE6 761 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 RBM23Q86U06 439 aaKnown RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 MINDY1Q8N5J2 469 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 LSMEM1Q8N8F7 131 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 SYT2Q8N9I0 419 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 ZBTB8BQ8NAP8 495 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 POC1AQ8NBT0 407 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 KCTD6Q8NC69 237 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 WDR20Q8TBZ3 569 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 SORCS1Q8WY21 1168 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 LPGAT1Q92604 370 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 CD101Q93033 1021 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 ZNF622Q969S3 477 aaKnown RBP eCLIP3.09□□□□□ -1.911e-7■■■□□ 16
RFC1-209ENST00000504974 TMCO6Q96DC7 493 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 LMLNQ96KR4 655 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 PRMT6Q96LA8 375 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 FAM81BQ96LP2 452 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 ZNF583Q96ND8 569 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 ZNF582Q96NG8 517 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 DACH2Q96NX9 599 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 NEURL2Q9BR09 285 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 FNDC11Q9BVV2 318 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 CCDC106Q9BWC9 280 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 DENND2DQ9H6A0 471 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 SLC35C2Q9NQQ7 365 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 MIOSQ9NXC5 875 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 NKIRAS2Q9NYR9 191 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 PTTG2Q9NZH5 202 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 STK26Q9P289 416 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 POLG2Q9UHN1 485 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 FAF1Q9UNN5 650 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 TMEM184BQ9Y519 407 aaPredicted RBP3.09□□□□□ -1.91
RFC1-209ENST00000504974 TRPV2Q9Y5S1 764 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 CGNL1Q0VF96 1302 aa3.09□□□□□ -1.91
RFC1-209ENST00000504974 RGPD8O14715 1765 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms