RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 PTPRRQ15256 657 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 NRF1Q16656 503 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CYP51A1Q16850 503 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CNPY1Q3B7I2 92 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 GGTA1PQ4G0N0 100 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ARHGAP15Q53QZ3 475 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CARD16Q5EG05 197 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 DGKKQ5KSL6 1271 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TMEM240Q5SV17 173 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 LRRC66Q68CR7 880 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 HMBOX1Q6NT76 420 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CRTC1Q6UUV9 634 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 SCIMPQ6UWF3 145 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TRIM46Q7Z4K8 759 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 SPPL2CQ8IUH8 684 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 DNAJB14Q8TBM8 379 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 LKAAEAR1Q8TD35 194 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ESAMQ96AP7 390 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 LMLNQ96KR4 655 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CDK15Q96Q40 435 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TMEM79Q9BSE2 394 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 C17orf80Q9BSJ5 609 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TNKS2Q9H2K2 1166 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 EGFL7Q9UHF1 273 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ZMYM5Q9UJ78 669 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 POLR3HQ9Y535 204 aaPredicted RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 IGLV3-16A0A075B6K0 115 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 A0A1W2PRU2 124 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 INPP4BO15327 924 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TAPBPO15533 448 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 MAP3K13O43283 966 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 GUCA1CO95843 209 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 IL6P05231 212 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 MAPK1P28482 360 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 GGT5P36269 586 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 GNPDA1P46926 289 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 HTR6P50406 440 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CCNHP51946 323 aaPredicted RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 MYBPC1Q00872 1141 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 PRKCQQ04759 706 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 DYNC1I2Q13409 638 aaKnown RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 APOFQ13790 326 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ARHGEF7Q14155 803 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 PLEKHS1Q5SXH7 462 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 NANOGP8Q6NSW7 305 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 BORAQ6PGQ7 559 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 LILRA6Q6PI73 481 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ELMSAN1Q6PJG2 1045 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 NEK10Q6ZWH5 1172 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 KIAA2013Q8IYS2 634 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CLDN19Q8N6F1 224 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 LEMD2Q8NC56 503 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TTC16Q8NEE8 873 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 HM13Q8TCT9 377 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 NAT14Q8WUY8 206 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 DGCR14Q96DF8 476 aaKnown RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 TEX37Q96LM6 180 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CCDC115Q96NT0 180 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CGREF1Q99674 301 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CIB1Q99828 191 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 OSBPL6Q9BZF3 934 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 SLC32A1Q9H598 525 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 NANOGQ9H9S0 305 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 CD320Q9NPF0 282 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 SMOXQ9NWM0 555 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 INTS6Q9UL03 887 aaKnown RBP11.75□□□□□ -0.53
NUP54-202ENST00000502850 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 PRSS21Q9Y6M0 314 aa11.75□□□□□ -0.53
NUP54-202ENST00000502850 ANKRD12Q6UB98 2062 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 WASH3PC4AMC7 463 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 C9JVG2 144 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 NUAK1O60285 661 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 AP2A2O94973 939 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 H6PDO95479 791 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 CLDN9O95484 217 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 LDLRP01130 860 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 ACRP10323 421 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 G6PDP11413 515 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 CDH1P12830 882 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 SLC2A4P14672 509 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 ACPPP15309 386 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 UGT1A6P19224 532 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 CYP2A7P20853 494 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 UGT1A1P22309 533 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 UGT1A4P22310 534 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 GSTT1P30711 240 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 UGT1A3P35503 534 aa11.74□□□□□ -0.53
NUP54-202ENST00000502850 UGT1A5P35504 534 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms