RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ADRA1BP35368 520 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 TGFBR2P37173 567 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 AGTR2P50052 363 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 UBE3AQ05086 875 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 OR4D1Q15615 310 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 BTBD16Q32M84 506 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 GTDC1Q4AE62 458 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 HIPK1Q86Z02 1210 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 FLCNQ8NFG4 579 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 REXO5Q96IC2 774 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 APOL4Q9BPW4 351 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 AIG1Q9NVV5 245 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 AGO1Q9UL18 857 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 POLHQ9Y253 713 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 PNMA8CA0A1B0GUJ8 204 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 NR6A1Q15406 480 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 ZNF648Q5T619 568 aaPredicted RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 ZDHHC17Q8IUH5 632 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 SVOPLQ8N434 492 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 RDH12Q96NR8 316 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 FDXACB1Q9BRP7 624 aaPredicted RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 VAPAQ9P0L0 249 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 RCOR3Q9P2K3 495 aaPredicted RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 POLR3HQ9Y535 204 aaPredicted RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 CXCR6O00574 342 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 POLR1CO15160 346 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 TLL1O43897 1013 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 WDR47O94967 919 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 FHP07954 510 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 HOXD8P13378 290 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 MAXP61244 160 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 MVKQ03426 396 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 PTPRCAPQ14761 206 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 PRSS48Q7RTY5 328 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 C11orf84Q9BUA3 381 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 HSPB11Q9Y547 144 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 PEX16Q9Y5Y5 336 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 A0A0U1RQS6 177 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 PDHXO00330 501 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 TSPAN3O60637 253 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 KATNA1O75449 491 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 VIPP01282 170 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 SOX6P35712 828 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 HNF4AP41235 474 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC9A3P48764 834 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 CLCN5P51795 746 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 ARHGDIAP52565 204 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 ARMCX4Q5H9R4 360 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 TUBA3EQ6PEY2 450 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 ATPAF2Q8N5M1 289 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 KBTBD8Q8NFY9 601 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 WNT8BQ93098 351 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 SMPD4Q9NXE4 827 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 VNN3Q9NY84 501 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 MARCH4Q9P2E8 410 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 TMEFF2Q9UIK5 374 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 AAR2Q9Y312 384 aaKnown RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 KCTD3Q9Y597 815 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 H3BUI4 141 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 G6PDP11413 515 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 DDOSTP39656 456 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 BACE1P56817 501 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 OSTM1Q86WC4 334 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 FAM217AQ8IXS0 508 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 GALNT6Q8NCL4 622 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 CLHC1Q8NHS4 586 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 DEDD2Q8WXF8 326 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 UBXN10Q96LJ8 280 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 R3HDMLQ9H3Y0 253 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 DUSP21Q9H596 190 aa12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■□□ 19
GAPVD1-220ENST00000497580 PDP1Q9P0J1 537 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-220ENST00000497580 OR2A25A4D2G3 310 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 B8ZZF3 427 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 RPLP0P05388 317 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 PIK3CGP48736 1102 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 IRF3Q14653 427 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 DDR2Q16832 855 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms