RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 KLHL42Q9P2K6 505 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 PCOLCE2Q9UKZ9 415 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SLC39A10Q9ULF5 831 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 BTBD3Q9Y2F9 522 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 HECTD1Q9ULT8 2610 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 MYO18BQ8IUG5 2567 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 IFRD1O00458 451 aaPredicted RBP19.59■□□□□ 0.73
CTSD-206ENST00000497544 GPC4O75487 556 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 LDOC1O95751 146 aaPredicted RBP19.59■□□□□ 0.73
CTSD-206ENST00000497544 ITGA2BP08514 1039 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 CD9P21926 228 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 PDHA2P29803 388 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 RPIAP49247 311 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 CLCN7P51798 805 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 BIRC2Q13490 618 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 USP10Q14694 798 aaKnown RBP19.59■□□□□ 0.73
CTSD-206ENST00000497544 IYDQ6PHW0 289 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 TAOK1Q7L7X3 1001 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 NAGSQ8N159 534 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 TSPAN17Q96FV3 270 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 GPR22Q99680 433 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 FETUBQ9UGM5 382 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 ZNF180Q9UJW8 692 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 WDR37Q9Y2I8 494 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 MED16Q9Y2X0 877 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 CFAP46Q8IYW2 2715 aa19.59■□□□□ 0.73
CTSD-206ENST00000497544 KIR2DS5A0A0G2JLQ3 304 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 A0A0G2JNG1 304 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 KIR2DS3K7RE56 304 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 KRT38O76015 456 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 SLCO2B1O94956 709 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 EML2O95834 649 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 FDXRP22570 491 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 TAS2R39P59534 338 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 IFFO1Q0D2I5 559 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 KIR2DS5Q14953 304 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 CLCA4Q14CN2 919 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 MROH9Q5TGP6 573 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 XKR5Q6UX68 686 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 NAXDQ8IW45 347 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 ARL10Q8N8L6 244 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 FAM181AQ8N9Y4 354 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 MAPK15Q8TD08 544 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 APOLD1Q96LR9 279 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 SLC30A3Q99726 388 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 OLFM1Q99784 485 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 CCDC86Q9H6F5 360 aaKnown RBP19.58■□□□□ 0.72
CTSD-206ENST00000497544 EVA1BQ9NVM1 165 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 SLC24A2Q9UI40 661 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 RAXQ9Y2V3 346 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 ZNF462Q96JM2 2506 aa19.58■□□□□ 0.72
CTSD-206ENST00000497544 A6NCN8 305 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 NOBOXO60393 691 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 SHBGP04278 402 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 BRAFP15056 766 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 STMN1P16949 149 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 CNTFP26441 200 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 RGS4P49798 205 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 DAB2P98082 770 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 TIAL1Q01085 375 aaKnown RBP eCLIP19.57■□□□□ 0.72
CTSD-206ENST00000497544 KRT33BQ14525 404 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 NR0B2Q15466 257 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 C14orf28Q4W4Y0 310 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 CAPRIN2Q6IMN6 1127 aaKnown RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 ADGRD1Q6QNK2 874 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 PAQR3Q6TCH7 311 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 RAB44Q7Z6P3 723 aaPredicted RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 SLC9B2Q86UD5 537 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 VRK3Q8IV63 474 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 TRIM48Q8IWZ4 208 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 ACVR1CQ8NER5 493 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 GPR156Q8NFN8 814 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 SPDYE1Q8NFV5 336 aaPredicted RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 CD200R1Q8TD46 325 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 DCAKDQ8WVC6 231 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 SKA2Q8WVK7 121 aaPredicted RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 PATE1Q8WXA2 126 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 CXorf40BQ96DE9 158 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 CNDP2Q96KP4 475 aaKnown RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 C12orf66Q96MD2 445 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 INSM2Q96T92 566 aaPredicted RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 OR52A5Q9H2C5 316 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 PPCSQ9HAB8 311 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 SYTL2Q9HCH5 934 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 IGSF5Q9NSI5 407 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 ARGLU1Q9NWB6 273 aaPredicted RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 NCKIPSDQ9NZQ3 722 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 SCHIP1Q9P0W5 487 aaPredicted RBP19.57■□□□□ 0.72
CTSD-206ENST00000497544 FTSJ1Q9UET6 329 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 PADI4Q9UM07 663 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 CDYLQ9Y232 598 aa19.57■□□□□ 0.72
CTSD-206ENST00000497544 VIPP01282 170 aa19.56■□□□□ 0.72
CTSD-206ENST00000497544 NUDT17P0C025 328 aa19.56■□□□□ 0.72
CTSD-206ENST00000497544 CBSLP0DN79 551 aa19.56■□□□□ 0.72
CTSD-206ENST00000497544 XRCC1P18887 633 aaPredicted RBP19.56■□□□□ 0.72
CTSD-206ENST00000497544 CBSP35520 551 aa19.56■□□□□ 0.72
CTSD-206ENST00000497544 DUSP3P51452 185 aaPredicted RBP19.56■□□□□ 0.72
CTSD-206ENST00000497544 ABRQ12979 859 aa19.56■□□□□ 0.72
CTSD-206ENST00000497544 RPE65Q16518 533 aa19.56■□□□□ 0.72
CTSD-206ENST00000497544 ACSBG2Q5FVE4 666 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms