RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TBC1D1Q86TI0 1168 aaPredicted RBP21.26■□□□□ 0.99
C9orf3-222ENST00000496567 SFRP1Q8N474 314 aa21.26■□□□□ 0.99
C9orf3-222ENST00000496567 EID2Q8N6I1 236 aa21.26■□□□□ 0.99
C9orf3-222ENST00000496567 ARL10Q8N8L6 244 aa21.26■□□□□ 0.99
C9orf3-222ENST00000496567 TFGQ92734 400 aaPredicted RBP21.26■□□□□ 0.99
C9orf3-222ENST00000496567 INSM2Q96T92 566 aaPredicted RBP21.26■□□□□ 0.99
C9orf3-222ENST00000496567 VIPAS39Q9H9C1 493 aa21.26■□□□□ 0.99
C9orf3-222ENST00000496567 NCKIPSDQ9NZQ3 722 aa21.26■□□□□ 0.99
C9orf3-222ENST00000496567 SCHIP1Q9P0W5 487 aaPredicted RBP21.26■□□□□ 0.99
C9orf3-222ENST00000496567 SIRPGQ9P1W8 387 aa21.26■□□□□ 0.99
C9orf3-222ENST00000496567 A0A096LPK6 155 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 XRCC1P18887 633 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-222ENST00000496567 ABRQ12979 859 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 RPE65Q16518 533 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 UNC5DQ6UXZ4 953 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 SLC9B2Q86UD5 537 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 CYP4X1Q8N118 509 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 FAM181AQ8N9Y4 354 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 MAPK15Q8TD08 544 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 ACMSDQ8TDX5 336 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 MZB1Q8WU39 189 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 CXorf40BQ96DE9 158 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 IMP3Q9NV31 184 aaKnown RBP21.25■□□□□ 0.99
C9orf3-222ENST00000496567 TSR3Q9UJK0 312 aaKnown RBP21.25■□□□□ 0.99
C9orf3-222ENST00000496567 ARHGEF17Q96PE2 2063 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-222ENST00000496567 WDR87Q6ZQQ6 2873 aa21.25■□□□□ 0.99
C9orf3-222ENST00000496567 ZFHX2Q9C0A1 2572 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-222ENST00000496567 DNAH14Q0VDD8 3507 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 OR52A4PA6NMU1 304 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 TRIM38O00635 465 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 RGS16O15492 202 aaPredicted RBP21.24■□□□□ 0.99
C9orf3-222ENST00000496567 GDF9O60383 454 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 NOBOXO60393 691 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 RFPL1O75677 317 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 MATN4O95460 622 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 TSPAN12O95859 305 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 RPN2P04844 631 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 CCDC166P0CW27 439 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 MTHFD1P11586 935 aaKnown RBP21.24■□□□□ 0.99
C9orf3-222ENST00000496567 NDUFS1P28331 727 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 CYHR1Q6ZMK1 362 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 TRIM48Q8IWZ4 208 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 GPR156Q8NFN8 814 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 ANKRD49Q8WVL7 239 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 UBXN10Q96LJ8 280 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 VPS11Q9H270 941 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 STN1Q9H668 368 aaKnown RBP21.24■□□□□ 0.99
C9orf3-222ENST00000496567 ASF1AQ9Y294 204 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 COLEC10Q9Y6Z7 277 aa21.24■□□□□ 0.99
C9orf3-222ENST00000496567 EP300Q09472 2414 aaPredicted RBP21.24■□□□□ 0.99
C9orf3-222ENST00000496567 TRBV23OR9-2A0A075B6M9 112 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 GOLGA6L10A6NI86 522 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 SIGLEC6O43699 453 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 CD59P13987 128 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 RPIAP49247 311 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 KRT33BQ14525 404 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 C14orf28Q4W4Y0 310 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 STPG1Q5TH74 334 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 PIWIL4Q7Z3Z4 852 aaKnown RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 C17orf82Q86X59 251 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 CFAP61Q8NHU2 1237 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 SLC37A2Q8TED4 501 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 SETD7Q8WTS6 366 aaKnown RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 PATE1Q8WXA2 126 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 DERL2Q9GZP9 239 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 MVB12BQ9H7P6 319 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 POT1Q9NUX5 634 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 ZNF446Q9NWS9 450 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 ZNF624Q9P2J8 865 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 CPNE7Q9UBL6 633 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 CFAP20Q9Y6A4 193 aaKnown RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 VIPP01282 170 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 LTA4HP09960 611 aaKnown RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 MYZAPP0CAP1 466 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 COL6A2P12110 1019 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 SLC19A1P41440 591 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 LIMK1P53667 647 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 ATP6V0D1P61421 351 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 BIRC2Q13490 618 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 CSHL1Q14406 222 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 FAM83EQ2M2I3 478 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 PPM1JQ5JR12 505 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 TTC23LQ6PF05 361 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 SPNS2Q8IVW8 549 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 RBM12BQ8IXT5 1001 aaKnown RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 SLC35F3Q8IY50 421 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 ARL14Q8N4G2 192 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 KYQ8NBH2 561 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 RHBDD1Q8TEB9 315 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 PKNOX2Q96KN3 472 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 APOLD1Q96LR9 279 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 TRIT1Q9H3H1 467 aaKnown RBP21.23■□□□□ 0.99
C9orf3-222ENST00000496567 EVA1BQ9NVM1 165 aa21.23■□□□□ 0.99
C9orf3-222ENST00000496567 CATP04040 527 aaKnown RBP21.22■□□□□ 0.99
C9orf3-222ENST00000496567 C8GP07360 202 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 CCNFP41002 786 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 FASLGP48023 281 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 UBE2IP63279 158 aaKnown RBP21.22■□□□□ 0.99
C9orf3-222ENST00000496567 HHEXQ03014 270 aa21.22■□□□□ 0.99
C9orf3-222ENST00000496567 SFTPA2Q8IWL1 248 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms