RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PON1P27169 355 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 ITPKBP27987 946 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 HOXD9P28356 352 aaPredicted RBP6.54□□□□□ -1.36
VIM-207ENST00000495528 GTF2H1P32780 548 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 GRK6P43250 576 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 KLK7P49862 253 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 TKTL1P51854 596 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 TIRAPP58753 221 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 YWHAGP61981 247 aaKnown RBP eCLIP6.54□□□□□ -1.36
VIM-207ENST00000495528 RPS14P62263 151 aaKnown RBP6.54□□□□□ -1.36
VIM-207ENST00000495528 CETN1Q12798 172 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 E2F5Q15329 346 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 SYCP1Q15431 976 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 CBWD6Q4V339 395 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 MPPE1Q53F39 396 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 RAB41Q5JT25 222 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 CBWD3Q5JTY5 395 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 CBWD5Q5RIA9 395 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 KRT39Q6A163 491 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 FBXO38Q6PIJ6 1188 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 NAPRTQ6XQN6 538 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 CHST9Q7L1S5 443 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 WDR53Q7Z5U6 358 aaPredicted RBP6.54□□□□□ -1.36
VIM-207ENST00000495528 ADIPOR2Q86V24 386 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 PIGZQ86VD9 579 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 GATAD2AQ86YP4 633 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 SPC24Q8NBT2 197 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 ANP32BQ92688 251 aaKnown RBP6.54□□□□□ -1.36
VIM-207ENST00000495528 SEMA4DQ92854 862 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 UBXN6Q9BZV1 441 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 TMEM8AQ9HCN3 771 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 PRSS16Q9NQE7 514 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 RAB20Q9NX57 234 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 PLA2G4CQ9UP65 541 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 ENTPD2Q9Y5L3 495 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 NBEAQ8NFP9 2946 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 LOC400499M0QZD8 3231 aa6.54□□□□□ -1.36
VIM-207ENST00000495528 NUMA1Q14980 2115 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 KNTC1P50748 2209 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 A0A1B0GTQ1 180 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 FAM234BA2RU67 622 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 TULP2O00295 520 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 CES2O00748 559 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 PAPSS1O43252 624 aaPredicted RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 TLX3O43711 291 aaPredicted RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 COQ9O75208 318 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 C1QL1O75973 258 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 DNTTP04053 509 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 WNT1P04628 370 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 IGHV4-34P06331 123 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 NPSP0C0P6 89 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ABCG1P45844 678 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 HSPA7P48741 367 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 MXI1P50539 228 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 SGSHP51688 502 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 RAD23BP54727 409 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 TIAL1Q01085 375 aaKnown RBP eCLIP6.53□□□□□ -1.36
VIM-207ENST00000495528 ZBTB16Q05516 673 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ENPEPQ07075 957 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 DNAJC3Q13217 504 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 SHBQ15464 509 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 EXOC3L4Q17RC7 722 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ARHGAP17Q68EM7 881 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 PM20D1Q6GTS8 502 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 MZT2AQ6P582 158 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ANKRD16Q6P6B7 361 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 GJB7Q6PEY0 223 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 RSRC2Q7L4I2 434 aaKnown RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 RRAGAQ7L523 313 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 BHLHA9Q7RTU4 235 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 TMPRSS12Q86WS5 348 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ARHGAP18Q8N392 663 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 METTL25Q8N6Q8 603 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.53□□□□□ -1.36
VIM-207ENST00000495528 SLC4A11Q8NBS3 891 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 FBXL13Q8NEE6 735 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 NEK11Q8NG66 645 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 RP9Q8TA86 221 aaKnown RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 LMO3Q8TAP4 145 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 WFIKKN2Q8TEU8 576 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 TMA16Q96EY4 203 aaKnown RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 ERGIC2Q96RQ1 377 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 MACROD1Q9BQ69 325 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ULBP1Q9BZM6 244 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 INTS2Q9H0H0 1204 aaKnown RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 ZNF700Q9H0M5 742 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 PCDHAC1Q9H158 963 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 PRDM13Q9H4Q3 707 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 EBF2Q9HAK2 575 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 SGK2Q9HBY8 427 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 UBE2TQ9NPD8 197 aaPredicted RBP6.53□□□□□ -1.36
VIM-207ENST00000495528 CISHQ9NSE2 258 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ABCB8Q9NUT2 735 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 GGA2Q9UJY4 613 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 STOML2Q9UJZ1 356 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 ADAM21Q9UKJ8 722 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 RIMKLBQ9ULI2 386 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 COQ4Q9Y3A0 265 aa6.53□□□□□ -1.36
VIM-207ENST00000495528 DAAM1Q9Y4D1 1078 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms