RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	ITM2A	O43736	263 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	GMDS	O60547	372 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PSMG1	O95456	288 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	CYBB	P04839	570 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PRG2	P13727	222 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	ENO3	P13929	434 aa	Predicted RBP	11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	TYR	P14679	529 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	TYRP1	P17643	537 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	GSTM5	P46439	218 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	STARD6	P59095	220 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	GAD2	Q05329	585 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PCDH1	Q08174	1060 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	CD300C	Q08708	224 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	FOXO1	Q12778	655 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	MMEL1	Q495T6	779 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	RAP1GAP2	Q684P5	730 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	RAB12	Q6IQ22	244 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PAPD4	Q6PIY7	484 aa	Known RBP	11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	FJX1	Q86VR8	437 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	C12orf40	Q86WS4	652 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	CHSY1	Q86X52	802 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	FAM131B	Q86XD5	332 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PPM1N	Q8N819	430 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	HUS1B	Q8NHY5	278 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	STMN2	Q93045	179 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	CAMK1G	Q96NX5	476 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	ELAC2	Q9BQ52	826 aa	Known RBP	11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	NUDT15	Q9NV35	164 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PSME2	Q9UL46	239 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	TCRBV5S1A1T	A0A578	114 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PMS2P1	A4D2B8	440 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PRR23A	A6NEV1	266 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919		H0YIV9	168 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919		H3BNX3	289 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	FZD6	O60353	706 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	BCAS1	O75363	584 aa	Predicted RBP	11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	TPTE	P56180	551 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	CREB5	Q02930	508 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	MAMLD1	Q13495	774 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	RAB6C	Q53S08	254 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	DGKK	Q5KSL6	1271 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	ADGRF1	Q5T601	910 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	SH3PXD2A	Q5TCZ1	1133 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PYHIN1	Q6K0P9	492 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	NANOGP8	Q6NSW7	305 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PAOX	Q6QHF9	649 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	ARC	Q7LC44	396 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	ZBTB44	Q8NCP5	570 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	POC1B	Q8TC44	478 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	TCP10L	Q8TDR4	215 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	FAM172A	Q8WUF8	416 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	RFK	Q969G6	155 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	BTN2A3P	Q96KV6	586 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	PKP4	Q99569	1192 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	TKTL2	Q9H0I9	626 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	RAB6C	Q9H0N0	254 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	MYLK2	Q9H1R3	596 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	SUV39H2	Q9H5I1	410 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	MCCC2	Q9HCC0	563 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	SLC24A2	Q9UI40	661 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	MRPS17	Q9Y2R5	130 aa	Known RBP	11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	CEPT1	Q9Y6K0	416 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	AP1M2	Q9Y6Q5	423 aa		11.41	□□□□□ -0.58
BRCA1-222	ENST00000493919	KCNU1	A8MYU2	1149 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	CFAP99	D6REC4	459 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	SLC22A2	O15244	555 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	LATS1	O95835	1130 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	F9	P00740	461 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	DCN	P07585	359 aa	Known RBP	11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	INHBB	P09529	407 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	UQCRB	P14927	111 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	SLC6A4	P31645	630 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	GSK3A	P49840	483 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	GALC	P54803	685 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	DCDC1	P59894	354 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	ABAT	P80404	500 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	FLI1	Q01543	452 aa	Predicted RBP	11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	RIPPLY1	Q0D2K3	151 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	ABR	Q12979	859 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	CHAF1B	Q13112	559 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	PMS2P3	Q13401	168 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	SCARB2	Q14108	478 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	PPP2R5E	Q16537	467 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	CYP2A13	Q16696	494 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	ASTE1	Q2TB18	679 aa	Predicted RBP	11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	GAB4	Q2WGN9	574 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	IQCC	Q4KMZ1	466 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	SLC9A4	Q6AI14	798 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	NADSYN1	Q6IA69	706 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	ADGRG6	Q86SQ4	1221 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	RASGRP3	Q8IV61	690 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	DEPDC4	Q8N2C3	294 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	CPXM2	Q8N436	756 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	WDR48	Q8TAF3	677 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	GTF3A	Q92664	365 aa	Known RBP	11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	CD101	Q93033	1021 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	NT5C3B	Q969T7	300 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	ARHGEF26	Q96DR7	871 aa		11.4	□□□□□ -0.58
BRCA1-222	ENST00000493919	PGAP3	Q96FM1	320 aa	Predicted RBP	11.4	□□□□□ -0.58

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