RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IFNEQ86WN2 208 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 CHERPQ8IWX8 916 aaKnown RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 ZBTB2Q8N680 514 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 TRIML2Q8N7C3 387 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 DCBLD1Q8N8Z6 715 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 ACOX2Q99424 681 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 RBM38Q9H0Z9 239 aaKnown RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 LINC00597Q9H2U6 94 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 ZNF696Q9H7X3 374 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 PTTG2Q9NZH5 202 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 TMED5Q9Y3A6 229 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 PIKFYVEQ9Y2I7 2098 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 AGAP14A8MT82 685 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 TRIM24O15164 1050 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SEC24DO94855 1032 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 ASLP04424 464 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 TYRP14679 529 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 LHCGRP22888 699 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 VARSP26640 1264 aaKnown RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 ERVPABLB-1P60509 514 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 PTSQ03393 145 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 GPRC6AQ5T6X5 926 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 C8orf82Q6P1X6 216 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 SPATA19Q7Z5L4 167 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 CDYL2Q8N8U2 506 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 PCYOX1LQ8NBM8 494 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 TSPAN14Q8NG11 270 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 BADQ92934 168 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 CDK15Q96Q40 435 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 FAM126AQ9BYI3 521 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 PFDN4Q9NQP4 134 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SPHK2Q9NRA0 654 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 V9GYQ6 96 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SOCS2O14508 198 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 SLC5A2P31639 672 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 DIO3P55073 304 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 GSTM4Q03013 218 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 Q6ZVU0 165 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 GOLGA7Q7Z5G4 137 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 ANKRD13BQ86YJ7 626 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 CHST14Q8NCH0 376 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 PDPRQ8NCN5 879 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 ROPN1LQ96C74 230 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 ZNF641Q96N77 438 aaPredicted RBP13.52□□□□□ -0.24
VCP-207ENST00000493886 TUBA8Q9NY65 449 aaPredicted RBP13.52□□□□□ -0.24
VCP-207ENST00000493886 NDUFAF1Q9Y375 327 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 GPR45Q9Y5Y3 372 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 MYO7AQ13402 2215 aa13.52□□□□□ -0.24
VCP-207ENST00000493886 TLL1O43897 1013 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 CLIC3O95833 236 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 GUCA1CO95843 209 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 MT-ND1P03886 318 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 GNAO1P09471 354 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 CAPN3P20807 821 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 APOFQ13790 326 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 LY6G5CQ5SRR4 150 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 LETMD1Q6P1Q0 360 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 DUS1LQ6P1R4 473 aaKnown RBP13.52□□□□□ -0.25
VCP-207ENST00000493886 ZBTB49Q6ZSB9 765 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 RFLNAQ6ZTI6 216 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 BPHLQ86WA6 291 aaPredicted RBP13.52□□□□□ -0.25
VCP-207ENST00000493886 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
VCP-207ENST00000493886 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 TMEM181Q9P2C4 612 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 OARD1Q9Y530 152 aa13.52□□□□□ -0.25
VCP-207ENST00000493886 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.25
VCP-207ENST00000493886 ZFC3H1O60293 1989 aaKnown RBP13.52□□□□□ -0.25
VCP-207ENST00000493886 C8BP07358 591 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ARL1P40616 181 aaPredicted RBP13.51□□□□□ -0.25
VCP-207ENST00000493886 CASP2P42575 452 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 NSG1P42857 185 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 NTHL1P78549 312 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 FPGSQ05932 587 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ZNF77Q15935 545 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 LRRC73Q5JTD7 316 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 TMEM240Q5SV17 173 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 RTL10Q7L3V2 364 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ADIPOR2Q86V24 386 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 DHFR2Q86XF0 187 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 SPPL2CQ8IUH8 684 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ADGRG2Q8IZP9 1017 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 FAM47BQ8NA70 645 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 OR2T11Q8NH01 316 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 APOL5Q9BWW9 433 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 SLC2A11Q9BYW1 496 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 AIG1Q9NVV5 245 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 ZDHHC3Q9NYG2 299 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 MAP10Q9P2G4 905 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 CD300AQ9UGN4 299 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 PTBP2Q9UKA9 531 aaKnown RBP13.51□□□□□ -0.25
VCP-207ENST00000493886 CARD8Q9Y2G2 431 aa13.51□□□□□ -0.25
VCP-207ENST00000493886 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms