RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-215	ENST00000490140	ASTE1	Q2TB18	679 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	ZRANB3	Q5FWF4	1079 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	PLEKHS1	Q5SXH7	462 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	CCDC181	Q5TID7	509 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	KAZN	Q674X7	775 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	DUS1L	Q6P1R4	473 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	MFSD7	Q6UXD7	560 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	CFAP206	Q8IYR0	622 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	ZNF567	Q8N184	647 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	FDCSP	Q8NFU4	85 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	PRR7	Q8TB68	274 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	PROKR1	Q8TCW9	393 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	HAUS1	Q96CS2	278 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	RMDN2	Q96LZ7	410 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	C5orf34	Q96MH7	638 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	COPS8	Q99627	209 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	PITPNM3	Q9BZ71	974 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	LUC7L	Q9NQ29	371 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	PCMTD2	Q9NV79	361 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	SRPK3	Q9UPE1	567 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	B3GNT3	Q9Y2A9	372 aa		11.44	□□□□□ -0.58
FDPS-215	ENST00000490140	SYCE3	A1L190	88 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140		A6NL46	340 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	TCP11X1	B4DZS4	312 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140		F8W8V4	182 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	QSOX1	O00391	747 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	GAPDHS	O14556	408 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	BUD23	O43709	281 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SEMA7A	O75326	666 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	POLB	P06746	335 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ATP1B2	P14415	290 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	PECAM1	P16284	738 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	PRDX3	P30048	256 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	FOLR3	P41439	243 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ARCN1	P48444	511 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ABR	Q12979	859 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ATP1A4	Q13733	1029 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	TAZ	Q16635	292 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	GPR33	Q49SQ1	333 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SPOCD1	Q6ZMY3	1216 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SNX20	Q7Z614	316 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	MRGPRE	Q86SM8	312 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	KATNAL2	Q8IYT4	538 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	RCOR2	Q8IZ40	523 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	NXPE1	Q8N323	547 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SLC38A9	Q8NBW4	561 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	OR4K2	Q8NGD2	314 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	OR1L3	Q8NH93	324 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	DENND1A	Q8TEH3	1009 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	COG1	Q8WTW3	980 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	FERD3L	Q96RJ6	166 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	FICD	Q9BVA6	458 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	NUDT9	Q9BW91	350 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	TFB2M	Q9H5Q4	396 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ABHD10	Q9NUJ1	306 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SAE1	Q9UBE0	346 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	NDOR1	Q9UHB4	597 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	ARL5A	Q9Y689	179 aa		11.43	□□□□□ -0.58
FDPS-215	ENST00000490140	SPTB	P11277	2137 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140		A1L4Q6	167 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	CCDC66	A2RUB6	948 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140		F5H423	210 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	APOC4-APOC2	K7ER74	178 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	OR2B3	O76000	313 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	APOC2	P02655	101 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	COMT	P21964	271 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	CTNNA2	P26232	953 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	OTX2	P32243	289 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	SHMT2	P34897	504 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	SSPN	Q14714	243 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	MYBPC3	Q14896	1274 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	TCEAL1	Q15170	157 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	CYP2A13	Q16696	494 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	PTCHD3	Q3KNS1	767 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	IRAK1BP1	Q5VVH5	260 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	SPESP1	Q6UW49	350 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	B4GALNT4	Q76KP1	1039 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	DAAM2	Q86T65	1068 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	AMIGO1	Q86WK6	493 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	CNGA4	Q8IV77	575 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	ZADH2	Q8N4Q0	377 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140		Q8NA96	180 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	TCTN2	Q96GX1	697 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	VPS50	Q96JG6	964 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	AP1M1	Q9BXS5	423 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	MFRP	Q9BY79	579 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	COG4	Q9H9E3	785 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	AGPAT4	Q9NRZ5	378 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	TXLNG	Q9NUQ3	528 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	FKBPL	Q9UIM3	349 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	SLC5A6	Q9Y289	635 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	CRYBG3	Q68DQ2	2970 aa		11.42	□□□□□ -0.58
FDPS-215	ENST00000490140	ABCA12	Q86UK0	2595 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms