RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 MTX2O75431 263 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 SRP72O76094 671 aaKnown RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 PRAMEF1O95521 474 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 EML2O95834 649 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 MYZAPP0CAP1 466 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 HGFP14210 728 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF7P17097 686 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 VCLP18206 1134 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 UGT1A6P19224 532 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 UGT1A1P22309 533 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 UGT1A4P22310 534 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC5A2P31639 672 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 STX2P32856 288 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 PHBP35232 272 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 UGT1A3P35503 534 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC1A2P43004 574 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF844Q08AG5 666 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 IFFO1Q0D2I5 559 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 TMEM115Q12893 351 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 C16orf72Q14CZ0 275 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 TYSND1Q2T9J0 566 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 LDLRAP1Q5SW96 308 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 TMEM164Q5U3C3 297 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 NEPROQ6NW34 567 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 TMEM71Q6P5X7 295 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 AFTPHQ6ULP2 937 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 CRTC3Q6UUV7 619 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 FAM151BQ6UXP7 276 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 GPR155Q7Z3F1 870 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 LDB1Q86U70 411 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 CILP2Q8IUL8 1156 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 C2CD4AQ8NCU7 369 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 OR4L1Q8NH43 312 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 FAM76AQ8TAV0 307 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 DCAKDQ8WVC6 231 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 SLC44A1Q8WWI5 657 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 CCDC74BQ96LY2 380 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 UBL7Q96S82 380 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 CYTH2Q99418 400 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 CCDC77Q9BR77 488 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 TMEM109Q9BVC6 243 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 OSGEPL1Q9H4B0 414 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 IARS2Q9NSE4 1012 aaKnown RBP10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 SMOXQ9NWM0 555 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 CPNE7Q9UBL6 633 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
SCAMP4-208ENST00000489554 IGLV3-16A0A075B6K0 115 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 LILRA5A6NI73 299 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PRR19A6NJB7 356 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CD3EAPO15446 510 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 FAM155BO75949 473 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 S1PR4O95977 384 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 THRAP10827 490 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 XRCC1P18887 633 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PAMP19021 973 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ITIH1P19827 911 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 IDSP22304 550 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CD82P27701 267 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CSF2RBP32927 897 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CSTF2P33240 577 aaKnown RBP eCLIP10.34□□□□□ -0.756e-8■□□□□ 9.6
SCAMP4-208ENST00000489554 PPM1FP49593 454 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 UBE2IP63279 158 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CXADRP78310 365 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PRAMEP78395 509 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 MPP1Q00013 466 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CTBP1Q13363 440 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 NFATC2Q13469 925 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 TERF2Q15554 542 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 DBN1Q16643 649 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PLA2G4EQ3MJ16 856 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 KHDC1Q4VXA5 237 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF470Q6ECI4 717 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 WDR74Q6RFH5 385 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 WASH2PQ6VEQ5 465 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 SNX20Q7Z614 316 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 GALNT7Q86SF2 657 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF761Q86XN6 746 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 TRAPPC5Q8IUR0 188 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ZNF547Q8IVP9 402 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CNPY4Q8N129 248 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 AGBL5Q8NDL9 886 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 DDHD1Q8NEL9 900 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 OR6P1Q8NGX9 317 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 EPS8L3Q8TE67 593 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 MZB1Q8WU39 189 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PAFAH2Q99487 392 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ROPN1BQ9BZX4 212 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 FAM96AQ9H5X1 160 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 UCK1Q9HA47 277 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 ROPN1Q9HAT0 212 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 WASH6PQ9NQA3 447 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PRDM8Q9NQV8 689 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CATSPERZQ9NTU4 200 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 PDP2Q9P2J9 529 aa10.34□□□□□ -0.75
SCAMP4-208ENST00000489554 CTNNAL1Q9UBT7 734 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms