RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SMPDL3BQ92485 455 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 SYN2Q92777 582 aaPredicted RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 FAM149B1Q96BN6 582 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ACCSQ96QU6 501 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 NAPGQ99747 312 aaPredicted RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 SH3GL2Q99962 352 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 YIPF4Q9BSR8 244 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 NHEJ1Q9H9Q4 299 aaPredicted RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 LRRC4Q9HBW1 653 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 PCDH12Q9NPG4 1184 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 CNGB3Q9NQW8 809 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ARGLU1Q9NWB6 273 aaPredicted RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 GPATCH2LQ9NWQ4 482 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 MYO6Q9UM54 1294 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ACTL7AQ9Y615 435 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 HS3ST3B1Q9Y662 390 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 BZW2Q9Y6E2 419 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 A0A0G2JNJ9 132 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 GTPBP10A4D1E9 387 aaKnown RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CFAP69A5D8W1 941 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 OR5H15A6NDH6 313 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 LRRC53A6NM62 1247 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 LINC01387J3KSC0 135 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 RNF225M0QZC1 329 aaPredicted RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 USP1O94782 785 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CLSTN1O94985 981 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 POP4O95707 220 aaKnown RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 GSRP00390 522 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 SERPING1P05155 500 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 FYNP06241 537 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CCDC172P0C7W6 258 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 TMIGD3P0DMS9 266 aaPredicted RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC2A4P14672 509 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 FPR1P21462 350 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ARL4DP49703 201 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 KLK7P49862 253 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CASP5P51878 434 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CDH4P55283 916 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ACTG1P63261 375 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 APBA1Q02410 837 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 BIRC3Q13489 604 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 SQLEQ14534 574 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 EXOC3L4Q17RC7 722 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CLEC12BQ2HXU8 276 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 TUBB8Q3ZCM7 444 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 MSS51Q4VC12 460 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ZNF766Q5HY98 468 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 FAM102AQ5T9C2 384 aaPredicted RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ABHD17BQ5VST6 288 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 MRPL14Q6P1L8 145 aaKnown RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ZNF662Q6ZS27 426 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC13A5Q86YT5 568 aaPredicted RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CEP112Q8N8E3 955 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 OR2AP1Q8NGE2 309 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 TEKT4Q8WW24 435 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 ALS2CR12Q96Q35 445 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 WDR24Q96S15 920 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 CHP1Q99653 195 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 FGFBP2Q9BYJ0 223 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 PLCB1Q9NQ66 1216 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 Q9UFV3 132 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 NDOR1Q9UHB4 597 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 GPN3Q9UHW5 284 aaPredicted RBP7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 GUCA1BQ9UMX6 200 aa7.2□□□□□ -1.26
EXOSC3-206ENST00000489414 HEATR5AQ86XA9 2040 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 OR5K4A6NMS3 321 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 EFCAB8A8MWE9 144 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 FAM157AC9JC47 383 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 XPO1O14980 1071 aaKnown RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 EXOC3O60645 756 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 XPAP23025 273 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 PTGER1P34995 402 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 GMPRP36959 345 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 CYP2J2P51589 502 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC8A3P57103 927 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 POLR2FP61218 127 aaKnown RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 ADCY2Q08462 1091 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 RALGDSQ12967 914 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 NCOA4Q13772 614 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 PSMD6Q15008 389 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 ACKR1Q16570 336 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 UGP2Q16851 508 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 SGSM1Q2NKQ1 1148 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 C5orf22Q49AR2 442 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 EMC4Q5J8M3 183 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 HIBCHQ6NVY1 386 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 WDR59Q6PJI9 974 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 WDR53Q7Z5U6 358 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 SETD3Q86TU7 594 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 TAC4Q86UU9 113 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 FAM20CQ8IXL6 584 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 SIX6OS1Q8N1H7 587 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 LZTR1Q8N653 840 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 ANKRD52Q8NB46 1076 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 NUP43Q8NFH3 380 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 BRIX1Q8TDN6 353 aaKnown RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 IGFBPL1Q8WX77 278 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 ANKRD7Q92527 254 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 PLEKHG4BQ96PX9 1271 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms