RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 MRI1Q9BV20 369 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 KLC2Q9H0B6 622 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 BRD8Q9H0E9 1235 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 RSPH9Q9H1X1 276 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CLMPQ9H6B4 373 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 HECAQ9UBI9 543 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 DKK4Q9UBT3 224 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 IL36AQ9UHA7 158 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 HEY1Q9Y5J3 304 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 APC2O95996 2303 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 hCG_1818297A0A087WSY0 165 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 A0A087WV48 116 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 C3orf70A6NLC5 250 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 H3BML4 177 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 J3KR12 359 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MCF2LO15068 1137 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF189O75820 626 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 POP4O95707 220 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 KRT10P13645 584 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 ENGP17813 658 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 FPR1P21462 350 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CCNCP24863 283 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CHRNA3P32297 505 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLC8A1P32418 973 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 GARSP41250 739 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 PEX5P50542 639 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CCNHP51946 323 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 COPAP53621 1224 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CLRN1P58418 232 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 RAP2BP61225 183 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 GBE1Q04446 702 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF33AQ06730 810 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MTM1Q13496 603 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 GRM3Q14832 879 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 TAZQ16635 292 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CFAP58Q5T655 872 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MARC1Q5VT66 337 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 TTLL10Q6ZVT0 673 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 DOK3Q7L591 496 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MTERF4Q7Z6M4 381 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CACUL1Q86Y37 369 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 CCDC13Q8IYE1 715 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 PLD5Q8N7P1 536 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZBTB34Q8NCN2 500 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 OR2AP1Q8NGE2 309 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 TFAP2CQ92754 450 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MIEF2Q96C03 454 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 HDAC11Q96DB2 347 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MTFMTQ96DP5 389 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 HES6Q96HZ4 224 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 TSGA13Q96PP4 275 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 WDR24Q96S15 920 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 HEMGNQ9BXL5 484 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 OSBPL8Q9BZF1 889 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 TM6SF2Q9BZW4 377 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 C11orf54Q9H0W9 315 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 PABPC3Q9H361 631 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 ITM2CQ9NQX7 267 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 FBXL12Q9NXK8 326 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 PACSIN2Q9UNF0 486 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MFHAS1Q9Y4C4 1052 aa8.05□□□□□ -1.12
TRAPPC12-221ENST00000489032 MYO18BQ8IUG5 2567 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 CKAP5Q14008 2032 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 CXorf49A8MYA2 514 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 H3BUI4 141 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 APOC4-APOC2K7ER74 178 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 K7ESM1 405 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 KPNA3O00505 521 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 MATN3O15232 486 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 MID1O15344 667 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 RNASEH2AO75792 299 aaKnown RBP8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 APOC2P02655 101 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 NFKBIAP25963 317 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 CD6P30203 668 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 P2RY2P41231 377 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 PI4KAP42356 2102 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 DPP6P42658 865 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 MMP13P45452 471 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 ABCG1P45844 678 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 TPMTP51580 245 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 MAP2K6P52564 334 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 AP1B1Q10567 949 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 HLTFQ14527 1009 aaKnown RBP eCLIP8.04□□□□□ -1.127e-7■■■□□ 15.5
TRAPPC12-221ENST00000489032 LLGL1Q15334 1064 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 CYTH1Q15438 398 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 TRIP6Q15654 476 aaKnown RBP8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 WHAMMP3Q1A5X7 153 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 MYLK3Q32MK0 819 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 SPDYCQ5MJ68 293 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 DPY19L3Q6ZPD9 716 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 BBS12Q6ZW61 710 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 LPCAT2Q7L5N7 544 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLC35F6Q8N357 371 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 CEP112Q8N8E3 955 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 TMIEQ8NEW7 156 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 OR2A12Q8NGT7 310 aa8.04□□□□□ -1.12
TRAPPC12-221ENST00000489032 IFI44Q8TCB0 444 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms