RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 INTS10Q9NVR2 710 aaKnown RBP3.28□□□□□ -1.88
RFC4-213ENST00000489028 IGHV4-61A0A0C4DH41 118 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 A0A1W2PRB8 838 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 MED19A0JLT2 244 aaPredicted RBP3.27□□□□□ -1.89
RFC4-213ENST00000489028 FEZF1A0PJY2 475 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 A6NCN8 305 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 ANTXRLA6NF34 631 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 B4DLN1 442 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 PSMD14O00487 310 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 SSX4O60224 188 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 ZWINTO95229 277 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 IGHV4-59P01825 116 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 PLA2G4BP0C869 781 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 CLK1P49759 484 aaKnown RBP3.27□□□□□ -1.89
RFC4-213ENST00000489028 MRPL12P52815 198 aaKnown RBP3.27□□□□□ -1.89
RFC4-213ENST00000489028 PNLIPRP2P54317 469 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 DMPKQ09013 629 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 KRT33BQ14525 404 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 ADAMTSL4-AS1Q5T5F5 129 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 ARHGEF16Q5VV41 709 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 TEX38Q6PEX7 206 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 FIGLAQ6QHK4 219 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 LINGO4Q6UY18 593 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 CEP57L1Q8IYX8 460 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 DDHD1Q8NEL9 900 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 FGFBP3Q8TAT2 258 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 RNF128Q8TEB7 428 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 SGK494Q96LW2 274 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 ARRDC1-AS1Q9H2J1 176 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 KCNK15Q9H427 330 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 SYNCQ9H7C4 482 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 TBC1D29Q9UFV1 150 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 RASAL2Q9UJF2 1139 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 ZNF148Q9UQR1 794 aa3.27□□□□□ -1.89
RFC4-213ENST00000489028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.27□□□□□ -1.89
RFC4-213ENST00000489028 FSD2A1L4K1 749 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 PRR32B1ATL7 298 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 CTDSP2O14595 271 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ADAMDEC1O15204 470 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ATP6V0E1O15342 81 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 EXTL3O43909 919 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 OR10H2O60403 315 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ZFAND5O76080 213 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 EML2O95834 649 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 RNF224P0DH78 156 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 TRIM21P19474 475 aaKnown RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 GCH1P30793 250 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 GABRA5P31644 462 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ACSL1P33121 698 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 IRX1P78414 480 aaPredicted RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 SP3Q02447 781 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 GPR17Q13304 367 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 TUBB2AQ13885 445 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 MAPRE1Q15691 268 aaKnown RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 MDH1BQ5I0G3 518 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 PLEKHS1Q5SXH7 462 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 CYP4A22Q5TCH4 519 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 WDR78Q5VTH9 848 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 PWWP2BQ6NUJ5 590 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ZNF554Q86TJ5 538 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ADIPOR2Q86V24 386 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 KBTBD6Q86V97 674 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 MYPOPQ86VE0 399 aaPredicted RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 CEP57Q86XR8 500 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 SCML4Q8N228 414 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 MAPKAPK5-AS1Q8N8E1 139 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 KBTBD8Q8NFY9 601 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 OR2T11Q8NH01 316 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ZNF653Q96CK0 615 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 MTERF3Q96E29 417 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 OLFM1Q99784 485 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 TREX2Q9BQ50 279 aaPredicted RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 TUBB2BQ9BVA1 445 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 SPATC1LQ9H0A9 340 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 WDR13Q9H1Z4 485 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ERVMER34-1Q9H9K5 563 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 INTS9Q9NV88 658 aaKnown RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 ARHGEF38Q9NXL2 777 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 TERF2IPQ9NYB0 399 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 TUBE1Q9UJT0 475 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 OSGIN1Q9UJX0 560 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 ZHX1Q9UKY1 873 aaPredicted RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 MTUS1Q9ULD2 1270 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 PTRH2Q9Y3E5 179 aaKnown RBP3.26□□□□□ -1.89
RFC4-213ENST00000489028 RIPK3Q9Y572 518 aa3.26□□□□□ -1.89
RFC4-213ENST00000489028 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 LOC101059948A0A1B0GTJ6 334 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 MEIOCA2RUB1 952 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 GAPDHSO14556 408 aaPredicted RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 XRCC3O43542 346 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 FAM157CP0CG43 387 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 CA4P22748 312 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 NRIP1P48552 1158 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 LUMP51884 338 aaPredicted RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 SIRPAP78324 504 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 CX3CL1P78423 397 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 LMOD3Q0VAK6 560 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 PCLAFQ15004 111 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms