RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 DAB2P98082 770 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 KIR2DS5Q14953 304 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 RBM20Q5T481 1227 aaKnown RBP10.07□□□□□ -0.8
SKA1-204ENST00000488454 MROH9Q5TGP6 573 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 TTC23LQ6PF05 361 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 OGFOD3Q6PK18 319 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 NAPRTQ6XQN6 538 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 RAPH1Q70E73 1250 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 KANSL1Q7Z3B3 1105 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 NAXDQ8IW45 347 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 MREGQ8N565 214 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 LILRA3Q8N6C8 439 aaPredicted RBP10.07□□□□□ -0.8
SKA1-204ENST00000488454 FAM181AQ8N9Y4 354 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 SIDT2Q8NBJ9 832 aaKnown RBP10.07□□□□□ -0.8
SKA1-204ENST00000488454 OR6C4Q8NGE1 309 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 LKAAEAR1Q8TD35 194 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 SH3KBP1Q96B97 665 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 C12orf66Q96MD2 445 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 GPR22Q99680 433 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 WWP1Q9H0M0 922 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 SYTL2Q9HCH5 934 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 FTSJ1Q9UET6 329 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 FETUBQ9UGM5 382 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 ZNF180Q9UJW8 692 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 TLK1Q9UKI8 766 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 PCOLCE2Q9UKZ9 415 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 MTO1Q9Y2Z2 717 aaKnown RBP10.07□□□□□ -0.8
SKA1-204ENST00000488454 ST14Q9Y5Y6 855 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 COLEC10Q9Y6Z7 277 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 MYO15AQ9UKN7 3530 aa10.07□□□□□ -0.8
SKA1-204ENST00000488454 CACNA1EQ15878 2313 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ZFHX2Q9C0A1 2572 aaPredicted RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 IQANK1A0A1B0GTG1 560 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 TLDC2A0PJX2 215 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 RHPN2P1A8MT19 583 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 GPC4O75487 556 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 SLCO2B1O94956 709 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 VIPP01282 170 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 RPN2P04844 631 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 SNRPAP09012 282 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 GIMD1P0DJR0 217 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CBSLP0DN79 551 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ENO3P13929 434 aaPredicted RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 FDXRP22570 491 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 NDUFS1P28331 727 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CRABP2P29373 138 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 PDHA2P29803 388 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CBSP35520 551 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 PLA2G5P39877 138 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 TAS2R39P59534 338 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 IL2P60568 153 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ABRQ12979 859 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CLCA4Q14CN2 919 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 RPE65Q16518 533 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 C14orf28Q4W4Y0 310 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ACSBG2Q5FVE4 666 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 LRRC8EQ6NSJ5 796 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 PAQR3Q6TCH7 311 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ALYREFQ86V81 257 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 SLC22A15Q8IZD6 547 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 NAGSQ8N159 534 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ARL14Q8N4G2 192 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 NKAPQ8N5F7 415 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 CFAP61Q8NHU2 1237 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 HNRNPLLQ8WVV9 542 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 TFGQ92734 400 aaPredicted RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 MTBPQ96DY7 904 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CNDP2Q96KP4 475 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 APOLD1Q96LR9 279 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 FERD3LQ96RJ6 166 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 EPB41L4BQ9H329 900 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 GPAMQ9HCL2 828 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 IMP3Q9NV31 184 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 GALPQ9UBC7 116 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 CPNE7Q9UBL6 633 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 PADI4Q9UM07 663 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ASF1AQ9Y294 204 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 BTBD3Q9Y2F9 522 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 WDR37Q9Y2I8 494 aa10.06□□□□□ -0.8
SKA1-204ENST00000488454 ZNF106Q9H2Y7 1883 aaKnown RBP10.06□□□□□ -0.8
SKA1-204ENST00000488454 DMDP11532 3685 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 OTOGLQ3ZCN5 2332 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 CPED1A4D0V7 1026 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 A6NCN8 305 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 PABPN1LA6NDY0 278 aaKnown RBP10.05□□□□□ -0.8
SKA1-204ENST00000488454 PRR19A6NJB7 356 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 SMIM23A6NLE4 172 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 OR52A4PA6NMU1 304 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 EIF3FO00303 357 aaPredicted RBP10.05□□□□□ -0.8
SKA1-204ENST00000488454 RASGRF2O14827 1237 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 KDM1AO60341 852 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 NOBOXO60393 691 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 EML2O95834 649 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 SHBGP04278 402 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 NUDT17P0C025 328 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 MTHFD1P11586 935 aaKnown RBP10.05□□□□□ -0.8
SKA1-204ENST00000488454 BRAFP15056 766 aa10.05□□□□□ -0.8
SKA1-204ENST00000488454 GLB1P16278 677 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms