RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FGF1P05230 155 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 UGT2B4P06133 528 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 F7P08709 466 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 C7P10643 843 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 RECQLP46063 649 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CSNK1DP48730 415 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SEMG2Q02383 582 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 STX5Q13190 355 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ZNF234Q14588 700 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ARMC12Q5T9G4 340 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 REP15Q6BDI9 236 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 FSTL4Q6MZW2 842 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CYP2R1Q6VVX0 501 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 NANOGNBQ7Z5D8 188 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 TMEM135Q86UB9 458 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ZSWIM9Q86XI8 627 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 PELI3Q8N2H9 469 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 KIFC1Q9BW19 673 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 YTHDF1Q9BYJ9 559 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ATP13A3Q9H7F0 1226 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 TMEM181Q9P2C4 612 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ARIH1Q9Y4X5 557 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ARL5AQ9Y689 179 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 FZD6O60353 706 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 CLPXO76031 633 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 PGLSO95336 258 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 BCL10O95999 233 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 APODP05090 189 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 C2P06681 752 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 ALPIP09923 528 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 MAP4P27816 1152 aaKnown RBP13.48□□□□□ -0.25
COPS7B-221ENST00000488111 GRIA3P42263 894 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 WASP42768 502 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 SEC13P55735 322 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 SLC14A2Q15849 920 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 PHKG1Q16816 387 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 POM121L1PQ3SYA9 428 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 LEXMQ3ZCV2 418 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 TMEM151AQ8N4L1 468 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 OR2T34Q8NGX1 318 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 OR2T3Q8NH03 318 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 HMGCLL1Q8TB92 370 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 ALPK1Q96QP1 1244 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 P2RY13Q9BPV8 354 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 ADGRE3Q9BY15 652 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 ACSS2Q9NR19 701 aa13.48□□□□□ -0.25
COPS7B-221ENST00000488111 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 A8MX80 341 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SDHDO14521 159 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 LSM1O15116 133 aaKnown RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 PFDN6O15212 129 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 TIMM44O43615 452 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 POP4O95707 220 aaKnown RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SBK3P0C264 359 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SERPINA4P29622 427 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 EIF2DP41214 584 aaKnown RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MLLT10P55197 1068 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 EIF4HQ15056 248 aaKnown RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MAPRE2Q15555 327 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SAMD4BQ5PRF9 694 aaKnown RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 C8orf82Q6P1X6 216 aaPredicted RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SERPINA13PQ6UXR4 307 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 STRA8Q7Z7C7 330 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 PIH1D2Q8WWB5 315 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 TPK1Q9H3S4 243 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CAB39LQ9H9S4 337 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CCM2LQ9NUG4 571 aaPredicted RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 LEFTY1O75610 366 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CTSLP07711 333 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 JUNBP17275 347 aaPredicted RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MATN1P21941 496 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CTHP32929 405 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 IL12RB1P42701 662 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MAPK8P45983 427 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CSRP3P50461 194 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 HLCSP50747 726 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MPP1Q00013 466 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 RAD51Q06609 339 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 ATP6AP1Q15904 470 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 LRRC73Q5JTD7 316 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 CADM3Q8N126 398 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 KDM1BQ8NB78 822 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MINDY2Q8NBR6 621 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MDGA1Q8NFP4 955 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 FAM110BQ8TC76 370 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 PNPT1Q8TCS8 783 aaKnown RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 GPN2Q9H9Y4 310 aaPredicted RBP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
COPS7B-221ENST00000488111 DAPK2Q9UIK4 370 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms