RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PWP1Q13610 501 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 FGD3Q5JSP0 725 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 C6orf136Q5SQH8 315 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 ARMC6Q6NXE6 501 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 TMEM220Q6QAJ8 160 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 CFAP206Q8IYR0 622 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 AHI1Q8N157 1196 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 OR13J1Q8NGT2 312 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 DNAJB8Q8NHS0 232 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 ARRDC2Q8TBH0 407 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 NAT14Q8WUY8 206 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 SPO11Q9Y5K1 396 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 LOC285095A0A1B0GVY8 99 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 MTX2O75431 263 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 RAP2AP10114 183 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 ACADMP11310 421 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 G6PDP11413 515 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 GM2AP17900 193 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 EPORP19235 508 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 RFC2P35250 354 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 SH3BP2P78314 561 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 DAB2P98082 770 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 EMX2Q04743 252 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 GRB7Q14451 532 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 RABL3Q5HYI8 236 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 KLHDC10Q6PID8 442 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 PRR23BQ6ZRT6 265 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 RD3Q7Z3Z2 195 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 CYP2U1Q7Z449 544 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 HIPK1Q86Z02 1210 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
TRA2B-214ENST00000487615 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 TDP1Q9NUW8 608 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 ADAMTS6Q9UKP5 1117 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 INSL6Q9Y581 213 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 ACTL7AQ9Y615 435 aa11.6□□□□□ -0.55
TRA2B-214ENST00000487615 LEFTY2O00292 366 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 CXCR6O00574 342 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 EI24O14681 340 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 H6PDO95479 791 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 IDH2P48735 452 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 SLC2A7Q6PXP3 512 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 SATL1Q86VE3 508 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 C17orf64Q86WR6 236 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 TMCO5AQ8N6Q1 288 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 TRPV3Q8NET8 790 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 PNPT1Q8TCS8 783 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 CASD1Q96PB1 797 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 RBM4BQ9BQ04 359 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 RBM4Q9BWF3 364 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 EBPLQ9BY08 206 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 SLC29A3Q9BZD2 475 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 H2AFY2Q9P0M6 372 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ANGPT4Q9Y264 503 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 RUVBL1Q9Y265 456 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 LOC730098B7Z3J9 87 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ERN1O75460 977 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 PENKP01210 267 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 PRSS56P0CW18 603 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 GABRB3P28472 473 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ST13P50502 369 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 CCR3P51677 355 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 PDCD4Q53EL6 469 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 LRRC70Q7Z2Q7 622 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 DPF3Q92784 378 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 DACT3Q96B18 629 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 OAZ3Q9UMX2 235 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 GUCY1B2O75343 617 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 EBLN1P0CF75 366 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ZNF30P17039 623 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ITGA2P17301 1181 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 CREB5Q02930 508 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 SRSF11Q05519 484 aaKnown RBP11.59□□□□□ -0.55
TRA2B-214ENST00000487615 LMAN2Q12907 356 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 GPR107Q5VW38 600 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 MED27Q6P2C8 311 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 NCEH1Q6PIU2 408 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ERMP1Q7Z2K6 904 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 SYVN1Q86TM6 617 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 OFCC1Q8IZS5 231 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 PTERQ96BW5 349 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 GSTO2Q9H4Y5 243 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 DOLKQ9UPQ8 538 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 RWDD3Q9Y3V2 267 aa11.59□□□□□ -0.55
TRA2B-214ENST00000487615 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.55
TRA2B-214ENST00000487615 ATP1B2P14415 290 aaPredicted RBP11.58□□□□□ -0.55
TRA2B-214ENST00000487615 SLC6A2P23975 617 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 TRIM16LQ309B1 348 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 ARSIQ5FYB1 569 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 PIGGQ5H8A4 983 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 OR4A15Q8NGL6 344 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 MTERF1Q99551 399 aaKnown RBP11.58□□□□□ -0.55
TRA2B-214ENST00000487615 B4GALT6Q9UBX8 382 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 PTGDR2Q9Y5Y4 395 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 MYO9BQ13459 2157 aa11.58□□□□□ -0.55
TRA2B-214ENST00000487615 COL11A1P12107 1806 aaPredicted RBP11.58□□□□□ -0.56
TRA2B-214ENST00000487615 SNTNA6NMZ2 147 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms