RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 KLHDC8BQ8IXV7 354 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 NRSN1Q8IZ57 195 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 MMGT1Q8N4V1 131 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 AFAP1L2Q8N4X5 818 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 DEFB119Q8N690 84 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 FRMD1Q8N878 549 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SMYD1Q8NB12 490 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 GLIS1Q8NBF1 620 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 FBXO15Q8NCQ5 510 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 CEP76Q8TAP6 659 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 BRSK1Q8TDC3 778 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 BIRC7Q96CA5 298 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 NUS1Q96E22 293 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SERAC1Q96JX3 654 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 LENG8Q96PV6 779 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TSC22D3Q99576 134 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 APOL2Q9BQE5 337 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SLC17A9Q9BYT1 436 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 FAM192AQ9GZU8 254 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 CDH19Q9H159 772 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ARNT2Q9HBZ2 717 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 AASDHPPTQ9NRN7 309 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ERVK13-1Q9NX77 482 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 BFARQ9NZS9 450 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SAMD15Q9P1V8 674 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 NCDNQ9UBB6 729 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ANAPC5Q9UJX4 755 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 PCDHGA5Q9Y5G8 931 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TRPM6Q9BX84 2022 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 A0A1B0GTW7 788 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 MAGEB16A2A368 324 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 BCAT2O15382 392 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 STX7O15400 261 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SLC31A1O15431 190 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RAD51CO43502 376 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 LATO43561 262 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PLXNA2O75051 1894 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 USP12O75317 370 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RECQL5O94762 991 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 EPN2O95208 641 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 CLDN7O95471 211 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PAK4O96013 591 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PRLP01236 227 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 LMNAP02545 664 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PCCBP05166 539 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 IGHV4-34P06331 123 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RETP07949 1114 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PIRTP0C851 137 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 MLNP12872 115 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 TSHRP16473 764 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 LPOP22079 712 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 HTR1BP28222 390 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SPAM1P38567 509 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 NBL1P41271 181 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 MAGEA6P43360 314 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RABIFP47224 123 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 AFF3P51826 1226 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 STC1P52823 247 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 ARL4CP56559 192 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 C21orf59P57076 290 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SESN2P58004 480 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PPP2CBP62714 309 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PPP2CAP67775 309 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 CREB5Q02930 508 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 CAV1Q03135 178 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 OVGP1Q12889 678 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RALGDSQ12967 914 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 MTM1Q13496 603 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PTK2BQ14289 1009 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 KCNJ11Q14654 390 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 POU6F1Q14863 301 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SEPT7Q16181 437 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 DUOXA1Q1HG43 343 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SKIDA1Q1XH10 827 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 LRRK1Q38SD2 2015 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PCID2Q5JVF3 399 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 FAM182AQ5T1J6 154 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RNASEH2BQ5TBB1 312 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SEL1L3Q68CR1 1132 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 RAET1GQ6H3X3 334 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 ZCCHC8Q6NZY4 707 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 CASC4Q6P4E1 433 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 ABHD17CQ6PCB6 329 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SPAG17Q6Q759 2223 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 CRTC1Q6UUV9 634 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 CCDC121Q6ZUS5 278 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 UBE2R2Q712K3 238 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 NLRP9Q7RTR0 991 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 STRA8Q7Z7C7 330 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 TSPAN33Q86UF1 283 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 DCP2Q8IU60 420 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SYT12Q8IV01 421 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 SLC41A1Q8IVJ1 513 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 ZC3H7AQ8IWR0 971 aaKnown RBP6.12□□□□□ -1.43
SF3B1-209ENST00000479532 PDIK1LQ8N165 341 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 MCUQ8NE86 351 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 OR52K1Q8NGK4 314 aa6.12□□□□□ -1.43
SF3B1-209ENST00000479532 GABPB2Q8TAK5 448 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms