RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 TUFT1Q9NNX1 390 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 MID1IP1Q9NPA3 183 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 POT1Q9NUX5 634 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 OSER1Q9NX31 292 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 CWC25Q9NXE8 425 aaPredicted RBP4.95□□□□□ -1.62
UPF3B-203ENST00000478840 VPS18Q9P253 973 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 CPSF3Q9UKF6 684 aaKnown RBP4.95□□□□□ -1.62
UPF3B-203ENST00000478840 ITGA11Q9UKX5 1188 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 AMDHD2Q9Y303 409 aa4.95□□□□□ -1.62
UPF3B-203ENST00000478840 FAM90A10PA6NDY2 464 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 OR5K3A6NET4 321 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 C15orf62A8K5M9 175 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 MEIS2O14770 477 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 MID1O15344 667 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 AP5Z1O43299 807 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 GPR137BO60478 399 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 IGHV2-70P01814 119 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SNRNP70P08621 437 aaKnown RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 THEGLP0DJG4 465 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SAGP10523 405 aaPredicted RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SSTR2P30874 369 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 GMPSP49915 693 aaPredicted RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 KHKP50053 298 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SNU13P55769 128 aaKnown RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 BRWD1-AS2P59051 145 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 PTENP60484 403 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 ACTN3Q08043 901 aaPredicted RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SPOUT1Q5T280 376 aaKnown RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 TXNRD3NBQ6F5E7 133 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 MFSD12Q6NUT3 480 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 TMEM182Q6ZP80 229 aaPredicted RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 DZIP1Q86YF9 867 aaKnown RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 KLHL7Q8IXQ5 586 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 RBMXL3Q8N7X1 1067 aaKnown RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 OR14A16Q8NHC5 309 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SPATA22Q8NHS9 363 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 FAM216AQ8WUB2 273 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SLC38A5Q8WUX1 472 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 HEXDCQ8WVB3 486 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 NSMAFQ92636 917 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 KRT35Q92764 455 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 TEKT1Q969V4 418 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SPATA33Q96N06 139 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 ATP6V0BQ99437 205 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 UTP14AQ9BVJ6 771 aaKnown RBP4.94□□□□□ -1.62
UPF3B-203ENST00000478840 CNIH4Q9P003 139 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 TBC1D7Q9P0N9 293 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SEPT10Q9P0V9 454 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
UPF3B-203ENST00000478840 ABCC9O60706 1549 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 IGLV5-52A0A0A0MRZ9 124 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ELOVL7A1L3X0 281 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 CLEC18AA5D8T8 446 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 YDJCA8MPS7 323 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 GCNT3O95395 438 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 PNPP00491 289 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 SOAT1P35610 550 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ATP6V1E1P36543 226 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 WNT5AP41221 380 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 DLK1P80370 383 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 COG7P83436 770 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 MAT1AQ00266 395 aaKnown RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 BNC1Q01954 994 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ZNF155Q12901 538 aaPredicted RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 TRAF2Q12933 501 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 TNK1Q13470 666 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ZNF234Q14588 700 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 LASP1Q14847 261 aaKnown RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 KBTBD12Q3ZCT8 623 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ZNF789Q5FWF6 425 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 TRNP1Q6NT89 227 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ENPP7Q6UWV6 458 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 COLCA1Q6ZS62 124 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 PIM3Q86V86 326 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 C4orf19Q8IY42 314 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 RNF113BQ8IZP6 322 aaKnown RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 CLEC18CQ8NCF0 446 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 DBF4BQ8NFT6 615 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ABTB1Q969K4 478 aaPredicted RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 ST6GALNAC6Q969X2 333 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 CCDC47Q96A33 483 aaKnown RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 CSF3RQ99062 836 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 SPRTNQ9H040 489 aaPredicted RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 Q9N2K0 584 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 DNAJC17Q9NVM6 304 aaKnown RBP4.93□□□□□ -1.62
UPF3B-203ENST00000478840 HIF1ANQ9NWT6 349 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 RNF150Q9ULK6 438 aa4.93□□□□□ -1.62
UPF3B-203ENST00000478840 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.93□□□□□ -1.622e-6■■■■□ 25.6
UPF3B-203ENST00000478840 GTPBP10A4D1E9 387 aaKnown RBP4.92□□□□□ -1.62
UPF3B-203ENST00000478840 PRR32B1ATL7 298 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 TMEM178BH3BS89 294 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 SOCS2O14508 198 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 CLDN14O95500 239 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 WDPCPO95876 746 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 OLFM2O95897 454 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 GLUD1P00367 558 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 PSG1P11464 419 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 EPCAMP16422 314 aa4.92□□□□□ -1.62
UPF3B-203ENST00000478840 GM2AP17900 193 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms