RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PYGMP11217 842 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 KDELR1P24390 212 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 TAS2R40P59535 323 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 DCDP81605 110 aaKnown RBP16.63■□□□□ 0.25
VIM-204ENST00000478746 AIMP2Q13155 320 aaKnown RBP16.63■□□□□ 0.25
VIM-204ENST00000478746 PDK1Q15118 436 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 CDHR3Q6ZTQ4 885 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 FJX1Q86VR8 437 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 CFAP206Q8IYR0 622 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 PLD5Q8N7P1 536 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 PPP4R1Q8TF05 950 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 COG1Q8WTW3 980 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 RAPGEF5Q92565 580 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 RMDN2Q96LZ7 410 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 GBP5Q96PP8 586 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 FERD3LQ96RJ6 166 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 CCM2Q9BSQ5 444 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 PITPNM3Q9BZ71 974 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 PKP3Q9Y446 797 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 AP1M2Q9Y6Q5 423 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 MYO7BQ6PIF6 2116 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
VIM-204ENST00000478746 A0A1W2PQJ5 194 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 BTN3A3O00478 584 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 BTN3A1O00481 513 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 BUD23O43709 281 aaKnown RBP16.62■□□□□ 0.25
VIM-204ENST00000478746 PROSCO94903 275 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 STSP08842 583 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 PVRP15151 417 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 TSFMP43897 325 aaKnown RBP16.62■□□□□ 0.25
VIM-204ENST00000478746 CDC16Q13042 620 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 NOMO1Q15155 1222 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 STX1AQ16623 288 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 TEX44Q53QW1 395 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 PPP1R32Q7Z5V6 425 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 ZNF398Q8TD17 642 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 AP1M1Q9BXS5 423 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 LMBRD1Q9NUN5 540 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 HACD3Q9P035 362 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 FAM153AQ9UHL3 310 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 CDYLQ9Y232 598 aa16.62■□□□□ 0.25
VIM-204ENST00000478746 BZW2Q9Y6E2 419 aaKnown RBP16.62■□□□□ 0.25
VIM-204ENST00000478746 LOC285095A0A1B0GVY8 99 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 CCDC66A2RUB6 948 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 AGPSO00116 658 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 GAPDHSO14556 408 aaPredicted RBP16.61■□□□□ 0.25
VIM-204ENST00000478746 PPP1R12AO14974 1030 aaPredicted RBP16.61■□□□□ 0.25
VIM-204ENST00000478746 OR2B3O76000 313 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 TNNT3P45378 269 aaPredicted RBP16.61■□□□□ 0.25
VIM-204ENST00000478746 ART3Q13508 389 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 SIRPB2Q5JXA9 342 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 AGAP7PQ5VUJ5 663 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 RHBDD2Q6NTF9 364 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 GLT6D1Q7Z4J2 308 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 HOOK3Q86VS8 718 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 SLC25A41Q8N5S1 370 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 PROKR1Q8TCW9 393 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 BLOC1S5Q8TDH9 187 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.61■□□□□ 0.25
VIM-204ENST00000478746 NAT14Q8WUY8 206 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 AGAP4Q96P64 663 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 MAK16Q9BXY0 300 aaKnown RBP16.61■□□□□ 0.25
VIM-204ENST00000478746 SPRTNQ9H040 489 aaPredicted RBP16.61■□□□□ 0.25
VIM-204ENST00000478746 SMOXQ9NWM0 555 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 DOCK10Q96BY6 2186 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 HIVEP1P15822 2718 aa16.61■□□□□ 0.25
VIM-204ENST00000478746 C2orf74A8MZ97 194 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 EPOP01588 193 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 WNT3AP56704 352 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 FOXL2P58012 376 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 ZNF169Q14929 603 aaPredicted RBP16.6■□□□□ 0.25
VIM-204ENST00000478746 SLC9A5Q14940 896 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 PRAMEF13Q5VWM6 474 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 IGFL2Q6UWQ7 119 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 NPNTQ6UXI9 565 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 GDF7Q7Z4P5 450 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 DAAM2Q86T65 1068 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 LILRA3Q8N6C8 439 aaPredicted RBP16.6■□□□□ 0.25
VIM-204ENST00000478746 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
VIM-204ENST00000478746 CNDP1Q96KN2 507 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 LINC00615Q96LM1 132 aaPredicted RBP16.6■□□□□ 0.25
VIM-204ENST00000478746 TEKT5Q96M29 485 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 NRTNQ99748 197 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 DEF6Q9H4E7 631 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 TFB2MQ9H5Q4 396 aaKnown RBP16.6■□□□□ 0.25
VIM-204ENST00000478746 ITGB1BP2Q9UKP3 347 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 CSMD2Q7Z408 3487 aa16.6■□□□□ 0.25
VIM-204ENST00000478746 TACC2O95359 2948 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 LRRD1A4D1F6 860 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 H3BMH7 237 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 APOL1O14791 398 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 STX7O15400 261 aaKnown RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 CNOT3O75175 753 aaKnown RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 UMODP07911 640 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 CHRNA4P43681 627 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 NKAIN1Q4KMZ8 207 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 BCL7AQ4VC05 210 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 IRAK1BP1Q5VVH5 260 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms