RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 KLHL23Q8NBE8 558 aa9.6□□□□□ -0.87
CMC1-209ENST00000477739 REXO5Q96IC2 774 aaKnown RBP9.6□□□□□ -0.87
CMC1-209ENST00000477739 IKZF5Q9H5V7 419 aa9.6□□□□□ -0.87
CMC1-209ENST00000477739 TARM1B6A8C7 271 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 TRIM24O15164 1050 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 APOL3O95236 402 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PRAMEF1O95521 474 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 DNTTP04053 509 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 FUCA1P04066 466 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 OR1D2P34982 312 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PABPC1LQ4VXU2 614 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 CYHR1Q6ZMK1 362 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 DSG4Q86SJ6 1040 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 POC5Q8NA72 575 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 NDNFQ8TB73 568 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 MAL2Q969L2 176 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ISL2Q96A47 359 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 OTUB1Q96FW1 271 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 ZIC5Q96T25 663 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ZDHHC4Q9NPG8 344 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 TREX1Q9NSU2 369 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ERVK-18Q9QC07 812 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 RHCGQ9UBD6 479 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 OPTCQ9UBM4 332 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 CAB39Q9Y376 341 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 SAMHD1Q9Y3Z3 626 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 TESMINQ9Y4I5 508 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 A0A1W2PP18 115 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 GNG14A0A1W2PPG7 69 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 FXYD1O00168 92 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 INSIG1O15503 277 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ANGPTL1O95841 491 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 CKMP06732 381 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 MBL2P11226 248 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 CTGFP29279 349 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PTGER1P34995 402 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 RFC2P35250 354 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 MXD1Q05195 221 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 TNK2Q07912 1038 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 IRF5Q13568 498 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 CRY1Q16526 586 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PDE12Q6L8Q7 609 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 PPP4R4Q6NUP7 873 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 DOK6Q6PKX4 331 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 KIAA0408Q6ZU52 694 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 RAET1EQ8TD07 263 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 STARD7Q9NQZ5 370 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ACTR3BQ9P1U1 418 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 EIF3LQ9Y262 564 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 ATP11BQ9Y2G3 1177 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PSMD11O00231 422 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PRRG1O14668 218 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 SEC24AO95486 1093 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 VIPP01282 170 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 TACR2P21452 398 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 HTR7P34969 479 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 SGSHP51688 502 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ARHGDIAP52565 204 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 NFATC3Q12968 1075 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ABRQ12979 859 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 TAB1Q15750 504 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ADRM1Q16186 407 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PHKG1Q16816 387 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 RUNDC3AQ59EK9 446 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ANKS3Q6ZW76 656 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 THAP5Q7Z6K1 395 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 ADGRG2Q8IZP9 1017 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 EID3Q8N140 333 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 OR8H2Q8N162 312 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PIK3C3Q8NEB9 887 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 MDGA1Q8NFP4 955 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 FUBP1Q96AE4 644 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 TMEM125Q96AQ2 219 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 IMP4Q96G21 291 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 ABHD8Q96I13 439 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 COX4I2Q96KJ9 171 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 KCNC2Q96PR1 638 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 CGREF1Q99674 301 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 BARD1Q99728 777 aaKnown RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 HOPXQ9BPY8 73 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 INPP5KQ9BT40 448 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 FUNDC2Q9BWH2 189 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 GPR62Q9BZJ7 368 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PDP1Q9P0J1 537 aaPredicted RBP9.59□□□□□ -0.87
CMC1-209ENST00000477739 SCML2Q9UQR0 700 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 PDE10AQ9Y233 779 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 GMPPBQ9Y5P6 360 aa9.59□□□□□ -0.87
CMC1-209ENST00000477739 LOC730098B7Z3J9 87 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 TNFRSF10BO14763 440 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 PFDN6O15212 129 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 FFAR2O15552 330 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 CLDN7O95471 211 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 MTHFD2P13995 350 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 JAK1P23458 1154 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 EPHA2P29317 976 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 LEPRP48357 1165 aaKnown RBP9.58□□□□□ -0.88
CMC1-209ENST00000477739 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
CMC1-209ENST00000477739 SULT1C3Q6IMI6 304 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms