RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	KLC4	Q9NSK0	619 aa		12	□□□□□ -0.49
SBF1-208	ENST00000477234	PKD2L2	Q9NZM6	624 aa		12	□□□□□ -0.49
SBF1-208	ENST00000477234	DRG1	Q9Y295	367 aa	Known RBP	12	□□□□□ -0.49
SBF1-208	ENST00000477234	SLC30A1	Q9Y6M5	507 aa		12	□□□□□ -0.49
SBF1-208	ENST00000477234		F5H423	210 aa	Predicted RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	KMO	O15229	486 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	KCNJ13	O60928	360 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	FAM155B	O75949	473 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	STK10	O94804	968 aa	Known RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	TIAF1	O95411	115 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	ZBTB11	O95625	1053 aa	Predicted RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	FOLR1	P15328	257 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	IDS	P22304	550 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	STIP1	P31948	543 aa	Known RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	SLC19A1	P41440	591 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	SOX8	P57073	446 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	EIF3E	P60228	445 aa	Known RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	OTUD4	Q01804	1114 aa	Known RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	PTS	Q03393	145 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	SSPN	Q14714	243 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	INSC	Q1MX18	579 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	AGAP9	Q5VTM2	703 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	IRAK1BP1	Q5VVH5	260 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	C8orf74	Q6P047	294 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	CCDC137	Q6PK04	289 aa	Known RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	ABRAXAS1	Q6UWZ7	409 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	TSPAN33	Q86UF1	283 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	PARP9	Q8IXQ6	854 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	DSEL	Q8IZU8	1212 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	PRELID2	Q8N945	189 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	PPP4R1	Q8TF05	950 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	FAR1	Q8WVX9	515 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	NACC2	Q96BF6	587 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	CLIP3	Q96DZ5	547 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	WDR77	Q9BQA1	342 aa	Predicted RBP	11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	MGME1	Q9BQP7	344 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	TIMM29	Q9BSF4	260 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	MAGEB5	Q9BZ81	275 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	SLC7A5P2	Q9GIP4	190 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	NOD2	Q9HC29	1040 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	RAD18	Q9NS91	495 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	PCYOX1	Q9UHG3	505 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	HEY1	Q9Y5J3	304 aa		11.99	□□□□□ -0.49
SBF1-208	ENST00000477234	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234		H7C0C1	242 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	NDC80	O14777	642 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	LIAS	O43766	372 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	KIF1C	O43896	1103 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	RBP3	P10745	1247 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	HTR1E	P28566	365 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	COIL	P38432	576 aa	Predicted RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	TSFM	P43897	325 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	ATP5O	P48047	213 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	STC1	P52823	247 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	RPL26	P61254	145 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	C2orf54	Q08AI8	447 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	GPS2	Q13227	327 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	LLGL1	Q15334	1064 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	SIX1	Q15475	284 aa	Predicted RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	TESK1	Q15569	626 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	ZNF630	Q2M218	657 aa	Predicted RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	PDPK2P	Q6A1A2	396 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	TIGD7	Q6NT04	549 aa	Predicted RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	ARMC6	Q6NXE6	501 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	DARS2	Q6PI48	645 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	XKRX	Q6PP77	449 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	FAM180A	Q6UWF9	173 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	C4orf22	Q6V702	233 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	GSTA5	Q7RTV2	222 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	FJX1	Q86VR8	437 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	KLHL7	Q8IXQ5	586 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	ZBTB2	Q8N680	514 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	TFB1M	Q8WVM0	346 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	PIH1D2	Q8WWB5	315 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	C1orf54	Q8WWF1	131 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	RSC1A1	Q92681	617 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	SLCO2A1	Q92959	643 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	RUFY1	Q96T51	708 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	MLPH	Q9BV36	600 aa	Predicted RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	FAM83D	Q9H4H8	585 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	TRIM39	Q9HCM9	518 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	SMARCAL1	Q9NZC9	954 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	DTL	Q9NZJ0	730 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	RPL26L1	Q9UNX3	145 aa	Known RBP	11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	ZNF148	Q9UQR1	794 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	PRKAB1	Q9Y478	270 aa		11.98	□□□□□ -0.49
SBF1-208	ENST00000477234	CSMD2	Q7Z408	3487 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	IGHV5-51	A0A0C4DH38	117 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234		A0A0J9YYE9	177 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	TCRBV7S2A1N4T	A0A589	114 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	FAM187A	A6NFU0	413 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	MFSD11	O43934	449 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	SLC25A14	O95258	325 aa	Predicted RBP	11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	TRBC1	P01850	177 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	TUBB	P07437	444 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	EBLN1	P0CF75	366 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	DR1	Q01658	176 aa		11.97	□□□□□ -0.49
SBF1-208	ENST00000477234	SLC10A7	Q0GE19	358 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms