RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 XPO4Q9C0E2 1151 aaKnown RBP7.1□□□□□ -1.27
PRPF3-205ENST00000476970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.1□□□□□ -1.27
PRPF3-205ENST00000476970 VPS16Q9H269 839 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 KIR3DX1Q9H7L2 352 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 WDR54Q9H977 334 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 PCDH9Q9HC56 1237 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 NT5MQ9NPB1 228 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 NPDC1Q9NQX5 325 aaPredicted RBP7.1□□□□□ -1.27
PRPF3-205ENST00000476970 SEPT11Q9NVA2 429 aaKnown RBP7.1□□□□□ -1.27
PRPF3-205ENST00000476970 STMN3Q9NZ72 180 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 SLC24A2Q9UI40 661 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 NXT1Q9UKK6 140 aaKnown RBP7.1□□□□□ -1.27
PRPF3-205ENST00000476970 PSMD13Q9UNM6 376 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 CHKBQ9Y259 395 aa7.1□□□□□ -1.27
PRPF3-205ENST00000476970 SNRNP200O75643 2136 aaKnown RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 KIAA1324LA8MWY0 1029 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 F8VZ95 297 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 SOCS6O14544 535 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ZSCAN9O15535 394 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PRPSAP2O60256 369 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MAFKO60675 156 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PRAMEF2O60811 474 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 CNOT3O75175 753 aaKnown RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MTX2O75431 263 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 HEXAP06865 529 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PIM1P11309 404 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ST6GAL1P15907 406 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 IGFBP2P18065 325 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MST1P26927 711 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ARL4AP40617 200 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MTIF2P46199 727 aaKnown RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 HCAR3P49019 387 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MYBPHQ13203 477 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 DPYSQ14117 519 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 GALNT3Q14435 633 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 KRT33BQ14525 404 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 KRTCAP3Q53RY4 240 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ERMARDQ5T6L9 678 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ALG1LQ6GMV1 187 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ISM2Q6H9L7 571 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 TLDC1Q6P9B6 456 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 CLEC9AQ6UXN8 241 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 Q6ZPB1 254 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 C11orf96Q7Z7L8 435 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PRIMA1Q86XR5 153 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 SPPL2CQ8IUH8 684 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PSTKQ8IV42 348 aaKnown RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 FMR1NBQ8N0W7 255 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 GDAP1Q8TB36 358 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 BRSK1Q8TDC3 778 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ADAMTS18Q8TE60 1221 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 DENND1AQ8TEH3 1009 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 THAP3Q8WTV1 239 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 DLG3Q92796 817 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 HAS2Q92819 552 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 SDCCAG3Q96C92 435 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 C18orf12Q96KH6 178 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 C12orf66Q96MD2 445 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PPM1MQ96MI6 270 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 VPS35Q96QK1 796 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 KCTD15Q96SI1 283 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 TMEM121Q9BTD3 319 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
PRPF3-205ENST00000476970 PITPNM3Q9BZ71 974 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ZFYVE1Q9HBF4 777 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 NLRC4Q9NPP4 1024 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 FANCLQ9NW38 375 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 IRAK4Q9NWZ3 460 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 AMACRQ9UHK6 382 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 ST6GALNAC2Q9UJ37 374 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MAN1B1Q9UKM7 699 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 TTLL3Q9Y4R7 772 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 HEBP2Q9Y5Z4 205 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 HS3ST3B1Q9Y662 390 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 COLEC10Q9Y6Z7 277 aa7.09□□□□□ -1.27
PRPF3-205ENST00000476970 MXRA5Q9NR99 2828 aa7.09□□□□□ -1.28
PRPF3-205ENST00000476970 KLHL33A6NCF5 533 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 GOLGA6L4A6NEF3 574 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 E9PLN8 166 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 H3BRJ5 948 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 MAP2K7O14733 419 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 GADD45BO75293 160 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-205ENST00000476970 KLHL18O94889 574 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 ZRANB2O95218 330 aaKnown RBP eCLIP7.08□□□□□ -1.28
PRPF3-205ENST00000476970 TSPAN12O95859 305 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 HPP00738 406 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 ALBP02768 609 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 SLC35G4P0C7Q5 338 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 PYGMP11217 842 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 UNGP13051 313 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-205ENST00000476970 ABOP16442 354 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 PRDX3P30048 256 aaKnown RBP7.08□□□□□ -1.28
PRPF3-205ENST00000476970 SOX11P35716 441 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 CTSCP53634 463 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 AP2B1P63010 937 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 FMO1Q01740 532 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 TMEM115Q12893 351 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-205ENST00000476970 PTP4A2Q12974 167 aa7.08□□□□□ -1.28
PRPF3-205ENST00000476970 SYCP1Q15431 976 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms