RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 C3orf62Q6ZUJ4 267 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 CCDC25Q86WR0 208 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 TBC1D21Q8IYX1 336 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 ACVR1CQ8NER5 493 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 KCNJ9Q92806 393 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 GATA6Q92908 595 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 ATXN7L3BQ96GX2 97 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 LIN37Q96GY3 246 aaPredicted RBP17.35■□□□□ 0.37
SMIM4-202ENST00000476842 AARSD1Q9BTE6 412 aaKnown RBP17.35■□□□□ 0.37
SMIM4-202ENST00000476842 STRADBQ9C0K7 418 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 GALPQ9UBC7 116 aa17.35■□□□□ 0.37
SMIM4-202ENST00000476842 IGHV5-10-1A0A0J9YXX1 117 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 E5RI56 91 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 ZFC3H1O60293 1989 aaKnown RBP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 TYRP1P17643 537 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 SSTR1P30872 391 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 CSF2RBP32927 897 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 PPM1FP49593 454 aaPredicted RBP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 CLCN7P51798 805 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 GBX1Q14549 363 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 RTP5Q14D33 572 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 DNTTIP2Q5QJE6 756 aaKnown RBP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 KLHL35Q6PF15 583 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 CEP128Q6ZU80 1094 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 PLXDC1Q8IUK5 500 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 IFT81Q8WYA0 676 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 TMEM121BQ9BXQ6 578 aaPredicted RBP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 RAB33BQ9H082 229 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 TSPYL1Q9H0U9 437 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 TFB2MQ9H5Q4 396 aaKnown RBP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 ZFATQ9P243 1243 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 EPHA6Q9UF33 1036 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 MTRF1LQ9UGC7 380 aaKnown RBP17.34■□□□□ 0.37
SMIM4-202ENST00000476842 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 ASF1AQ9Y294 204 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 MED16Q9Y2X0 877 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 DHRS7Q9Y394 339 aa17.34■□□□□ 0.37
SMIM4-202ENST00000476842 C9P02748 559 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 ATP5DP30049 168 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 GPX6P59796 221 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 ABRQ12979 859 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 PLCL1Q15111 1095 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 SLC26A11Q86WA9 606 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 ZBTB2Q8N680 514 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 OR5AR1Q8NGP9 310 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 OR5K2Q8NHB8 316 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 C9orf72Q96LT7 481 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 TRIT1Q9H3H1 467 aaKnown RBP17.33■□□□□ 0.36
SMIM4-202ENST00000476842 LRRC4CQ9HCJ2 640 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 NSMCE4AQ9NXX6 385 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 TMEM9Q9P0T7 183 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 SLC17A6Q9P2U8 582 aa17.33■□□□□ 0.36
SMIM4-202ENST00000476842 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.36
SMIM4-202ENST00000476842 CCDC187A0A096LP49 1063 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 THRAP10827 490 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 CD9P21926 228 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
SMIM4-202ENST00000476842 CAPZBP47756 277 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 LSSP48449 732 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 TIAL1Q01085 375 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMIM4-202ENST00000476842 PRKG2Q13237 762 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 EIF3IQ13347 325 aaKnown RBP17.32■□□□□ 0.36
SMIM4-202ENST00000476842 CUL1Q13616 776 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 TTLL9Q3SXZ7 439 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 PHF19Q5T6S3 580 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 UNC5DQ6UXZ4 953 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 CAPN12Q6ZSI9 719 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 RELL1Q8IUW5 271 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 IFT20Q8IY31 132 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 OR4E2Q8NGC2 313 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 OR52E1Q8NGJ3 308 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 WDR36Q8NI36 951 aaKnown RBP17.32■□□□□ 0.36
SMIM4-202ENST00000476842 LCN9Q8WX39 176 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 JPH3Q8WXH2 748 aaPredicted RBP17.32■□□□□ 0.36
SMIM4-202ENST00000476842 RSC1A1Q92681 617 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 INPP5DQ92835 1189 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 FAM136AQ96C01 138 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 ZDHHC12Q96GR4 267 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 CCDC74BQ96LY2 380 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 SLC30A3Q99726 388 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 POLR1BQ9H9Y6 1135 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 KNTC1P50748 2209 aa17.32■□□□□ 0.36
SMIM4-202ENST00000476842 MN1Q10571 1320 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-202ENST00000476842 A0A1W2PNU3 283 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-202ENST00000476842 TCRBV9S1A1TA0A576 114 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 OR5K3A6NET4 321 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 HGSO14964 777 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-202ENST00000476842 CAPN5O15484 640 aaPredicted RBP17.31■□□□□ 0.36
SMIM4-202ENST00000476842 VPS26AO75436 327 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 RPN2P04844 631 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 MPSTP25325 297 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 ECHS1P30084 290 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
SMIM4-202ENST00000476842 ACSBG2Q5FVE4 666 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 UGT3A1Q6NUS8 523 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 RAB11FIP2Q7L804 512 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 ARHGAP22Q7Z5H3 698 aa17.31■□□□□ 0.36
SMIM4-202ENST00000476842 SIDT2Q8NBJ9 832 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms