RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ZNF678Q5SXM1 525 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 GKAP1Q5VSY0 366 aaPredicted RBP10.51□□□□□ -0.73
SP140-208ENST00000473711 CWF19L1Q69YN2 538 aaKnown RBP10.51□□□□□ -0.73
SP140-208ENST00000473711 GCNT7Q6ZNI0 430 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 FAM83HQ6ZRV2 1179 aaPredicted RBP10.51□□□□□ -0.73
SP140-208ENST00000473711 CHST15Q7LFX5 561 aaPredicted RBP10.51□□□□□ -0.73
SP140-208ENST00000473711 SPATA21Q7Z572 469 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 SLC22A15Q8IZD6 547 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 LSMEM2Q8N112 164 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 HM13Q8TCT9 377 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 PPP4R1Q8TF05 950 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 ASB11Q8WXH4 323 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 EDAQ92838 391 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 GLMNQ92990 594 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 ESAMQ96AP7 390 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 L3HYPDHQ96EM0 354 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 SEC16BQ96JE7 1060 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 CNDP1Q96KN2 507 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 EGFL8Q99944 293 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 SLC12A9Q9BXP2 914 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 TRIM54Q9BYV2 358 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 SHCBP1LQ9BZQ2 653 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 DRC3Q9H069 523 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 NPHS2Q9NP85 383 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 NUDT4Q9NZJ9 180 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 TMCO1Q9UM00 188 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 PDE10AQ9Y233 779 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 SLC17A4Q9Y2C5 497 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 PLEKHM1Q9Y4G2 1056 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 DOCK9Q9BZ29 2069 aa10.51□□□□□ -0.73
SP140-208ENST00000473711 GPR89AB7ZAQ6 455 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 GFYI3L273 518 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 K7ESF4 209 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 SCAMP1O15126 338 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 SLC16A5O15375 505 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 TAPBPO15533 448 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 GFRA3O60609 400 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 GPR89BP0CG08 455 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 TROVE2P10155 538 aaKnown RBP eCLIP10.5□□□□□ -0.73
SP140-208ENST00000473711 ACP5P13686 325 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 VCLP18206 1134 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 TSPAN8P19075 237 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 GNPDA1P46926 289 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 RPIAP49247 311 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 CCR3P51677 355 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 ALDH18A1P54886 795 aaKnown RBP10.5□□□□□ -0.73
SP140-208ENST00000473711 CDH13P55290 713 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 PFN3P60673 137 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 HERVK_113P63132 956 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 DMWDQ09019 674 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 NFATC4Q14934 902 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 SETDB1Q15047 1291 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 PYCR3Q53H96 274 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 TPRG1LQ5T0D9 272 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 ANKS6Q68DC2 871 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 XKR5Q6UX68 686 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 MBOAT1Q6ZNC8 495 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 Q6ZSR6 202 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 RD3Q7Z3Z2 195 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 GALNT13Q8IUC8 556 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 CCDC197Q8NCU1 140 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 OR56A4Q8NGH8 313 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 RFWD2Q8NHY2 731 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 MCOLN3Q8TDD5 553 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 WDR92Q96MX6 357 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 FOPNLQ96NB1 174 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 ERVK-6Q9BXR3 956 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 TRIM55Q9BYV6 548 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 ILKAPQ9H0C8 392 aaPredicted RBP10.5□□□□□ -0.73
SP140-208ENST00000473711 GSTO2Q9H4Y5 243 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 RMI1Q9H9A7 625 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 RDH14Q9HBH5 336 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 PARVBQ9HBI1 364 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 KLC4Q9NSK0 619 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 SPATA6Q9NWH7 488 aaPredicted RBP10.5□□□□□ -0.73
SP140-208ENST00000473711 DLGAP2Q9P1A6 1054 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 MARCOQ9UEW3 520 aaPredicted RBP10.5□□□□□ -0.73
SP140-208ENST00000473711 DCTN4Q9UJW0 460 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 SUFUQ9UMX1 484 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 DMTF1Q9Y222 760 aa10.5□□□□□ -0.73
SP140-208ENST00000473711 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.5□□□□□ -0.73
SP140-208ENST00000473711 BPTFQ12830 3046 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 A0A1W2PPC4 97 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 METTL12A8MUP2 240 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 STX16-NPEPL1H3BU86 382 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 STX16O14662 325 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 PSIP1O75475 530 aaKnown RBP10.49□□□□□ -0.73
SP140-208ENST00000473711 TGDSO95455 350 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 MATN4O95460 622 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 ENO2P09104 434 aaPredicted RBP10.49□□□□□ -0.73
SP140-208ENST00000473711 HIST1H2AGP0C0S8 130 aaPredicted RBP10.49□□□□□ -0.73
SP140-208ENST00000473711 HIST1H2ADP20671 130 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 CYP2A7P20853 494 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 KELP23276 732 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 MPSTP25325 297 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 MAP4P27816 1152 aaKnown RBP10.49□□□□□ -0.73
SP140-208ENST00000473711 HTR1BP28222 390 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 NUDT1P36639 197 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 SERPINB5P36952 375 aa10.49□□□□□ -0.73
SP140-208ENST00000473711 MAGEA9P43362 315 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms