RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SPATA22Q8NHS9 363 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 AGAP4Q96P64 663 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 FERD3LQ96RJ6 166 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 THAP2Q9H0W7 228 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 SLC25A51Q9H1U9 297 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 UBP1Q9NZI7 540 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 CDYLQ9Y232 598 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 HEBP2Q9Y5Z4 205 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 ANKRD12Q6UB98 2062 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 DOCK10Q96BY6 2186 aa18.37■□□□□ 0.53
NCKIPSD-209ENST00000470006 AKAP9Q99996 3911 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 GLYATL1P3A0A0U1RQE8 302 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 OR2B3O76000 313 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 MSL3P1P0C860 447 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 PTGER4P35408 488 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 HMGCLP35914 325 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 SOX8P57073 446 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 MYL5Q02045 173 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 ITGA9Q13797 1035 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 CDHR3Q6ZTQ4 885 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 CFAP206Q8IYR0 622 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 PQLC3Q8N755 202 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 DDHD1Q8NEL9 900 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 ACVR1CQ8NER5 493 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 NAT14Q8WUY8 206 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 MAGEB10Q96LZ2 347 aaPredicted RBP18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 TXLNGQ9NUQ3 528 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 OLAHQ9NV23 265 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 AIPL1Q9NZN9 384 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 SUCOQ9UBS9 1254 aaKnown RBP18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 AP1M2Q9Y6Q5 423 aa18.36■□□□□ 0.53
NCKIPSD-209ENST00000470006 NF1P21359 2839 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 AGPSO00116 658 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 ALOX12BO75342 701 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 JRKO75564 520 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 VWA2Q5GFL6 755 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 OR2L2Q8NH16 312 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 RBM41Q96IZ5 413 aaKnown RBP18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 RMDN2Q96LZ7 410 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 SPRTNQ9H040 489 aaPredicted RBP18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 EPS8L2Q9H6S3 715 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 CHST11Q9NPF2 352 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 DHCR7Q9UBM7 475 aaKnown RBP18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 FBXL4Q9UKA2 621 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 PKP3Q9Y446 797 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 KLF2Q9Y5W3 355 aaPredicted RBP18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 DCHS2Q6V1P9 2916 aa18.35■□□□□ 0.53
NCKIPSD-209ENST00000470006 BTN3A3O00478 584 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 BTN3A1O00481 513 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 BUD23O43709 281 aaKnown RBP18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 HTR1EP28566 365 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 PRKCIP41743 596 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 NOMO1Q15155 1222 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 TLR1Q15399 786 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 DEFB110Q30KQ9 67 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 PRAMEF13Q5VWM6 474 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 B3GNTL1Q67FW5 361 aaPredicted RBP18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 SLC25A41Q8N5S1 370 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 BCORP1Q8N888 145 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 TRABDQ9H4I3 376 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 SLC6A20Q9NP91 592 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 CDC23Q9UJX2 597 aa18.34■□□□□ 0.53
NCKIPSD-209ENST00000470006 C2orf74A8MZ97 194 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 KCNK10P57789 538 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 PRKD1Q15139 912 aaPredicted RBP18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 FCRL6Q6DN72 434 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 RHBDD2Q6NTF9 364 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 GLT6D1Q7Z4J2 308 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 DAAM2Q86T65 1068 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 ZNF655Q8N720 491 aaPredicted RBP18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 PROKR1Q8TCW9 393 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 BLOC1S5Q8TDH9 187 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 ITLN2Q8WWU7 325 aaPredicted RBP18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 CCM2Q9BSQ5 444 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 PITPNM3Q9BZ71 974 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 GLOD4Q9HC38 313 aa18.33■□□□□ 0.52
NCKIPSD-209ENST00000470006 MTORP42345 2549 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 A0A0A6YYK5 440 aaPredicted RBP18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 TRGV8A0A0C4DH27 118 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 CCDC78A2IDD5 438 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 KLHL33A6NCF5 533 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 UMODP07911 640 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 PYGMP11217 842 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 NKAIN1Q4KMZ8 207 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 LINC00696Q6ZRV3 163 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 APTXQ7Z2E3 356 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 MRGPRGQ86SM5 289 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 LILRA3Q8N6C8 439 aaPredicted RBP18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 ZNF398Q8TD17 642 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 DTX3LQ8TDB6 740 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 RELTQ969Z4 430 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 FAF2Q96CS3 445 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 RNF157Q96PX1 679 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms