RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CCDC28AQ8IWP9 274 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 FAM217AQ8IXS0 508 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 WDTC1Q8N5D0 677 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ALLCQ8N6M5 410 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 EMC1Q8N766 993 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 FIBINQ8TAL6 211 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 HMGB4Q8WW32 186 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 CAVIN3Q969G5 261 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SKA1Q96BD8 255 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PPP1R16AQ96I34 528 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 C1orf74Q96LT6 269 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PANX2Q96RD6 677 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 NPY6RQ99463 290 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 NUP85Q9BW27 656 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 MAK16Q9BXY0 300 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PCDHAC1Q9H158 963 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 NHEJ1Q9H9Q4 299 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PRMT8Q9NR22 394 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PIGVQ9NUD9 493 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ELOVL2Q9NXB9 296 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SLC39A10Q9ULF5 831 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SCML1Q9UN30 329 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SH2B3Q9UQQ2 575 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 MTF2Q9Y483 593 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 XIRP2A4UGR9 3374 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 REV3LO60673 3130 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 EDDM13A0A1B0GTR0 161 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ARHGAP42A6NI28 874 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 C2CD4BA6NLJ0 364 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 EEF2KO00418 725 aaKnown RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 SPOPO43791 374 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 RAMP2O60895 175 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 TECTAO75443 2155 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 KLKB1P03952 638 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 PLEKP08567 350 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 KRT10P13645 584 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 GNSP15586 552 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ZFXP17010 805 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 CHRNB2P17787 502 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 MST1P26927 711 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 HOXA6P31267 233 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 RFC1P35251 1148 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ACVRL1P37023 503 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ARHGAP25P42331 645 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ALDH9A1P49189 494 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 PGFP49763 221 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF75DP51815 510 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 PGDP52209 483 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 RPS24P62847 133 aaKnown RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ZXDBP98169 803 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 SLC20A2Q08357 652 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 MAMLD1Q13495 774 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 FHL3Q13643 280 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 BMPR2Q13873 1038 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 MAPKAPK3Q16644 382 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 BOLA3Q53S33 107 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 C2CD6Q53TS8 623 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ERMARDQ5T6L9 678 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 HECTD2Q5U5R9 776 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 KAZNQ674X7 775 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 MRNIPQ6NTE8 343 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 FBXO38Q6PIJ6 1188 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 WDR59Q6PJI9 974 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 Q6ZS52 159 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 BHLHA9Q7RTU4 235 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 WDR5BQ86VZ2 330 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 MYLK4Q86YV6 388 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 CCAR2Q8N163 923 aaKnown RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 AMER2Q8N7J2 671 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 KDM1BQ8NB78 822 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 KCTD6Q8NC69 237 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 CCDC112Q8NEF3 446 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF564Q8TBZ8 553 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 OR8D1Q8WZ84 308 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 NTAN1Q96AB6 310 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 SIPA1Q96FS4 1042 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 OMDQ99983 421 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 TSGA10Q9BZW7 698 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ISCUQ9H1K1 167 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 DHX35Q9H5Z1 703 aaKnown RBP6.29□□□□□ -1.4
PTCD3-208ENST00000469585 PRDM16Q9HAZ2 1276 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 ARHGEF38Q9NXL2 777 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 FOXJ2Q9P0K8 574 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 DNAJB11Q9UBS4 358 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 STON1Q9Y6Q2 735 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 BDP1A6H8Y1 2624 aa6.29□□□□□ -1.4
PTCD3-208ENST00000469585 GOLGA6L7A0A1B0GV03 622 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 ILVBLA1L0T0 632 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TMEM191CA6NGB0 347 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 MEI4A8MW99 385 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 K7EQS6 105 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 IFRD1O00458 451 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 FFAR2O15552 330 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 IGLV3-25P01717 112 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 FYNP06241 537 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 FESP07332 822 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 MSNP26038 577 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms