RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 SYTL1Q8IYJ3 562 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 CLEC1AQ8NC01 280 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 RBM41Q96IZ5 413 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 TLR10Q9BXR5 811 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 ARL5AQ9Y689 179 aa12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 USP9XQ93008 2570 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-214ENST00000469528 SPTBN1Q01082 2364 aaKnown RBP12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 AGAP14A8MT82 685 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 H7C0C1 242 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 GAPDHSO14556 408 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 SEMA7AO75326 666 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 AGTP01019 485 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 ITGALP20701 1170 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 ATP5OP48047 213 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 PRLHRP49683 370 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 NCF4Q15080 339 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 NOMO1Q15155 1222 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 FAM182AQ5T1J6 154 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 VWA5B1Q5TIE3 1220 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 RANBP10Q6VN20 620 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 AMIGO1Q86WK6 493 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 KATNAL2Q8IYT4 538 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 ZBTB2Q8N680 514 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 DENND1AQ8TEH3 1009 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 NACC2Q96BF6 587 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 TCTN2Q96GX1 697 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 OXNAD1Q96HP4 312 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 NUDT9Q9BW91 350 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 MFRPQ9BY79 579 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 FAM8A1Q9UBU6 413 aa12.3□□□□□ -0.44
GAPVD1-214ENST00000469528 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 ZNF749O43361 778 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 PECAM1P16284 738 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 CETN2P41208 172 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 ARCN1P48444 511 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 COPS2P61201 443 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 MLIPQ5VWP3 458 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 SLC6A19Q695T7 634 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 FBXO38Q6PIJ6 1188 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 MAMDC2Q7Z304 686 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 NXPE1Q8N323 547 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 ZADH2Q8N4Q0 377 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 TFGQ92734 400 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 TRAPPC9Q96Q05 1148 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 ALS2CR12Q96Q35 445 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 CHP1Q99653 195 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 FICDQ9BVA6 458 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 AP1M1Q9BXS5 423 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 GBA3Q9H227 469 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 SPTLC3Q9NUV7 552 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 POLG2Q9UHN1 485 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 B3GNT3Q9Y2A9 372 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 NOTCH2Q04721 2471 aa12.29□□□□□ -0.44
GAPVD1-214ENST00000469528 hCG_1818297A0A087WSY0 165 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 F8W8V4 182 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 APOC4-APOC2K7ER74 178 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 QSOX1O00391 747 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 GPR39O43194 453 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 OR2B3O76000 313 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 LCA5LO95447 670 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 APOC2P02655 101 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 CAPN1P07384 714 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 ST6GAL1P15907 406 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 CTNNA2P26232 953 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 FOLR3P41439 243 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 HADHBP55084 474 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 DCDP81605 110 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 PLOD1Q02809 727 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 ABRQ12979 859 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 PTPRCAPQ14761 206 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 KYNUQ16719 465 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 PRAMEF17Q5VTA0 474 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 DUS1LQ6P1R4 473 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 TLDC1Q6P9B6 456 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 IGFL3Q6UXB1 125 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 DAAM2Q86T65 1068 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 CNGA4Q8IV77 575 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 PROKR1Q8TCW9 393 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 PTERQ96BW5 349 aa12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 SNRNP40Q96DI7 357 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-214ENST00000469528 VPS50Q96JG6 964 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms